Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01985 ATGATCATTCCGGAGAAGAACCGCAAGGAGATCTGCAAGTACCTATTCCAAGAGGGAGTATGCTACGCGAAGAAGGACTTCAATCTTGCGAAACACCCTGAGATCGATGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCGAAGGAGTACGTTAGAGAGACGTTTGCCTGGATGCACTATTATTGGTTCCTCACCAACGACGGCATCGAGCATCTCAGGACTTACCTCAACCTTCCTTCTGAGATTGTCCCCGCCACTCTCAAGAAGCAGGCCAAGCTATCTGGCAGGCCTTTTGGCGGCCCACCGGGTGACCGCCCCAGGGGTCCACCTCGCTTTGAGGGAGAGCGCAGATTTGGTGATCGTGATGGATACCGTGGAGGTCCCCGTGGACCTGGTGGTGATTTTGGAGGAGACAAGGGTGGTGCTCCTGCTGACTACAGACCTTCTTTTGGGGGTGCTGGTGGAAGGCCTGGCTTTGGTCGTGGTGCTGGTGGTTTTGGAGGTGGTGCTCCAACTTCTTAA 534 0.5412 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKLSGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGAGGRPGFGRGAGGFGGGAPTS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01985 177 Gene3D - 1 104 IPR036388 -
Aip01g01985 177 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 176 - -
Aip01g01985 177 MobiDBLite consensus disorder prediction 96 177 - -
Aip01g01985 177 PANTHER 40S RIBOSOMAL PROTEIN S10 1 176 IPR037447 -
Aip01g01985 177 Pfam Plectin/S10 domain 3 94 IPR005326 -
Aip01g01985 177 MobiDBLite consensus disorder prediction 112 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01985 Aip-Chr1 106119539 106121807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01985 1 154 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 82.581 1.19e-75 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01985 K02947 K09422 zju:107414743 210.305