Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01982 ATGCCATCCCATGGTCATGCATTTGCAATGGCTGTGGTTGCTGCAGCCATTGCTATGCTACTTGTTGCTGTGATTTTCTTCTACTTGAAAAAATTTGCTTGCTCTTGGCATTACCACCATAGACACAGAGTTGCAGCGAGTTTTCGAAGAGAAGCAGGATTTAACCAAGAGGATATAAGGAAAGTTAATAATATGAAAGGGTTACTTGCTGAAGAAAATGGGATTGATATTCTGTATATGGTGGAAACACAAGGAAGGCATTTCAAAACTAGTTTCCCAACTAGAATATTCAATCCTAGTTATGAAGATAATGAAGAAAAGGAAGAAGAAGAAAAGAGAATAGATGTATTGGTTCAAAGATCTATGCATTATGAGACTCAAGAGGTTCCATTGCTATGTGAATCTCCAGGTTCAGGTTTGATGGTTCATGAGGATTTGGTTAAACCACTACAACCACCATCACCACCACCACCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTGTGCCTTCATCATCAAAACCACCACCACCACCTAAAAGAAAAGCCAACATGGAAAACAACACCTTAGAGGTTGCAGAATCAAGAGAGAAGGGTGCTAGCCAAACAAGACTCAAACCTCTACATTGGGATAAGGTTGTAGCTAATGTTGATCATTCTACAGTGTGGGATCACATCAATGATGGCTCTTTCAGGTTTGACAATGAACTCATAGAAACACTCTTTGGATATTCAACCAAGAACCAAACCAATGAAAGAAACCTATGTCATGCATCTTCAGCTCAGTTATTCCTTGTGGACCCTAGAAAATCCCAAAACACATCAATTGTGCTAAGGTCTCTTGCAATTTCTCGCAAGGAAATTATGGACGCGCTTGATGATGGACAAGGAATCAGTCTTGAGACACTTGAAAAACTTACTAAGATAGCTCCTACACAAGAAGAAGAAGCCAAAATCATCCAATTCAGTGGAAATCCAGATAAACTTGCTCATGCTGATTCATTCCTCTACTGCATCCTCAAAGCGGTTCCAACAGCATTCATTCGCCTAAAAGCAATGCTTTTCAGATCAAATTATGATTTTGAAGCTGTTCAGCTTAAAGAAAACTTACAAACACTTGAAAAGGGTTGCAAGGAGATGAGGGCTAGTGGCCTATTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGGAAACCGGATGAATGCCGGAACTTCTAGGGGAAATGCACAAGGTTTCAACCTAAATGCTCTTAGGAAGCTTCCTGATGTGAAAAGCATTGATGGGAAGACTAGTTTGCTACACTTCATTGTAGAGCAGGTGGCTCAGTCAGAAGGAAGAAGAGAAGCTATGAATCAAAAGCATAACATTCCCAAAATCAACGGTGATATAAGCAACTCCAATGAAAACAATAATAGCCTTGTGCAACATGAGACAGAGAAAGAGTATCTGATGCTTGGTTTACAAGTGTTATTGGGAGGTATAAAGGATGAATTATCCGAAGTAAAGAAAGCAGCAATAATTGATCATCAGAATTTCATTAGGATGTTATACATTCTCAATGCTCGTGTTAGCGAAATTCGAGAGATTGTAACCAAATGTTGTGGCGAGAACAATGAGAGAGGTGGATTTGTTAAGGAAATGAAAGGGTTTGCAGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGATGAACACCTTAGGATCATGGAGCTTGTGAAGAAAACCAATGAGTATTATCTTGGAGGTGGAGGAGGATCAAACCCCTTTGAACTGTTTCTTATTGTGAGAGATTTTGTTGACATGGTGGATGAGGTTTGCAGTGATCTCAGAAGGAAGATAGAAAAGAAGAATGTAGGAGGAGGAGAAGGTGCATCAACAACACCACCTCTTTCACCCTCAAAGAAAGCACCACTCAGGTTCCCAAAGTTTGATTTGCACTTTCTATCAAACATGTCAAGTGCGACATCATGTTCTAGCCTATCAGATGATGATTTCTGA 2205 0.3732 MPSHGHAFAMAVVAAAIAMLLVAVIFFYLKKFACSWHYHHRHRVAASFRREAGFNQEDIRKVNNMKGLLAEENGIDILYMVETQGRHFKTSFPTRIFNPSYEDNEEKEEEEKRIDVLVQRSMHYETQEVPLLCESPGSGLMVHEDLVKPLQPPSPPPPPPPPPPPPPPPSPPPPPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVPSSSKPPPPPKRKANMENNTLEVAESREKGASQTRLKPLHWDKVVANVDHSTVWDHINDGSFRFDNELIETLFGYSTKNQTNERNLCHASSAQLFLVDPRKSQNTSIVLRSLAISRKEIMDALDDGQGISLETLEKLTKIAPTQEEEAKIIQFSGNPDKLAHADSFLYCILKAVPTAFIRLKAMLFRSNYDFEAVQLKENLQTLEKGCKEMRASGLLLKFLEAILKAGNRMNAGTSRGNAQGFNLNALRKLPDVKSIDGKTSLLHFIVEQVAQSEGRREAMNQKHNIPKINGDISNSNENNNSLVQHETEKEYLMLGLQVLLGGIKDELSEVKKAAIIDHQNFIRMLYILNARVSEIREIVTKCCGENNERGGFVKEMKGFAEECEEELKVVKDEHLRIMELVKKTNEYYLGGGGGSNPFELFLIVRDFVDMVDEVCSDLRRKIEKKNVGGGEGASTTPPLSPSKKAPLRFPKFDLHFLSNMSSATSCSSLSDDDF 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01982 734 MobiDBLite consensus disorder prediction 129 180 - -
Aip01g01982 734 MobiDBLite consensus disorder prediction 686 706 - -
Aip01g01982 734 PANTHER FORMIN-LIKE PROTEIN 5 178 - -
Aip01g01982 734 PANTHER FORMIN-LIKE PROTEIN 239 729 - -
Aip01g01982 734 PANTHER FORMIN-RELATED 5 178 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip01g01982 734 SUPERFAMILY Formin homology 2 domain (FH2 domain) 159 685 - -
Aip01g01982 734 Coils Coil 613 633 - -
Aip01g01982 734 MobiDBLite consensus disorder prediction 210 273 - -
Aip01g01982 734 Gene3D Formin, FH2 domain 286 687 IPR042201 -
Aip01g01982 734 ProSiteProfiles Formin homology-2 (FH2) domain profile. 264 697 IPR015425 -
Aip01g01982 734 PANTHER FORMIN-RELATED 239 729 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip01g01982 734 MobiDBLite consensus disorder prediction 149 179 - -
Aip01g01982 734 Pfam Formin Homology 2 Domain 267 671 IPR015425 -
Aip01g01982 734 Coils Coil 432 452 - -
Aip01g01982 734 SMART it6_source 264 686 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01982 Aip-Chr1 106085062 106087955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01982 240 731 FH2 protein (formin) Gene Family AT1G70140 47.515 3.45e-144 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01982 - - aip:107618940 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01982 01 106085062 106087955 Aip01g01982 01 106085062 106087955 ECH