Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01966 ATGAAGGCCCAAAGTGCTGGTCGATTTATGATTTATGTGCATTCCAAGATGATGATAGTGGATGATGAATACATAATCATTGGATCTGCTAATATCAACGAGAGATCAATGAATGGTGGAAGAGACACTGAAATTGCTATGGGAGTTTATCAACCCTCTTATTTGGCAACCAATAAAAATAGTGCAAGGAGCCAGATCCATCGCTTTCACTTGTCCTTGTGGTACGAGCATCTTGGCATATATAAAGAAACTTTCCTCAACCCTGAACTTGAAGGTTGTATTAGGAGGATCCATCAGCTTGCTCAAAACAATTGGAACAGATATACAGGACAACCATTATGCACTTGTGGCCACCTCCTGCGCTATCCCATTGACATTTCTCTTGATGGAAGTATCACACATGATCCTGAAATATTCCCCGACACCCATGCAAGAATTCGAGGTAGTCAACACTTAGATAGTTGGGTGGTTCGTAATATAAGGTGGGCGGGCACAAAAGCTGAGTTTAGTATTTTGTATTAG 522 0.41 MKAQSAGRFMIYVHSKMMIVDDEYIIIGSANINERSMNGGRDTEIAMGVYQPSYLATNKNSARSQIHRFHLSLWYEHLGIYKETFLNPELEGCIRRIHQLAQNNWNRYTGQPLCTCGHLLRYPIDISLDGSITHDPEIFPDTHARIRGSQHLDSWVVRNIRWAGTKAEFSILY 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01966 173 Pfam Phospholipase D Active site motif 10 36 IPR001736 GO:0003824
Aip01g01966 173 PANTHER PHOSPHOLIPASE D 2 152 IPR015679 -
Aip01g01966 173 Pfam Phospholipase D C terminal 83 149 IPR024632 -
Aip01g01966 173 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 9 36 IPR001736 GO:0003824
Aip01g01966 173 SMART pld_4 9 36 IPR001736 GO:0003824
Aip01g01966 173 Gene3D Endonuclease Chain A 2 70 - -
Aip01g01966 173 SUPERFAMILY Phospholipase D/nuclease 7 91 - -
Aip01g01966 173 PANTHER PHOSPHOLIPASE D ALPHA 3 2 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01966 Aip-Chr1 104835125 104835874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01966 1 150 Phospholipase D Gene Family (Wang group) AT1G52570 59.091 3.34e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01966 K01115 - ahf:112749031 338.961