Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01945 ATGGTTTACCCTGAATTTTCCTTTTGGCAGGCTGGTCTTCTACCAGGTGTTCTGAATATAGTTTCTGGATTTGGCCCAATTGTTGGTGCAGCTCTTGCAAGTCACATGGACGTTGACAAGCTAGCATTTACTGGATCAACAGACACTGGAAAAATTGTGCTTGAATTGGCTGCAAGAAGCAATCTGAAGCTTATGACATTGGAGCTGGGAGGCAAATCAGCTTTCATTAGAAGTCAAAGAAAACGTGCTTTGAGACGCGTTGTTGGTGATCCATTCAAGAAGGGTATTGAAGAAGGCCCTCAGATTGACACAGAACAATTTGAGAAAGTGCTTAAGTACATAAGATTTGGAACTGAAAGCAATGCTACCCTTGAATGTGAGGGTCAGCGATTGGGCTCAAAAGGCTTCTTCATCGAGCCAACTGTTTTCTCCAATGATAAGGTATTCTTTTGTTTCATTTTGTATTGGCACAAGTGGCTTGCACATTAA 489 0.4192 MVYPEFSFWQAGLLPGVLNIVSGFGPIVGAALASHMDVDKLAFTGSTDTGKIVLELAARSNLKLMTLELGGKSAFIRSQRKRALRRVVGDPFKKGIEEGPQIDTEQFEKVLKYIRFGTESNATLECEGQRLGSKGFFIEPTVFSNDKVFFCFILYWHKWLAH 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01945 162 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 75 147 - -
Aip01g01945 162 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 7 76 - -
Aip01g01945 162 PANTHER BNAA06G20750D PROTEIN 75 147 - -
Aip01g01945 162 PANTHER BNAA06G20750D PROTEIN 7 76 - -
Aip01g01945 162 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 67 74 IPR029510 GO:0016491
Aip01g01945 162 Pfam Aldehyde dehydrogenase family 8 76 IPR015590 GO:0016491
Aip01g01945 162 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 8 72 IPR016162 GO:0016491
Aip01g01945 162 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 76 145 IPR016163 GO:0016620
Aip01g01945 162 SUPERFAMILY ALDH-like 8 146 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01945 Aip-Chr1 103624644 103625565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01945 8 147 Aldehyde Dehydrogenase Gene Family AT3G48000 57.377 5.19e-61 195