Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01941 ATGAATTCAAACCTCCTCTACAAGATTATTATTATTATTTCCTTCCTTGCAATCACAACTTGCCCAGTTGCCTCGGCGGAGAAATGCTCCTCGAACCACCAAGGAGCATGTCACAACCGGAGTGAGGCGCTCAAGTATAAGATAATAGCAATACTTGCAATTCTAGCGATGAGCATGATCGGCGTAACGCTGCCGATGCTCTCACGCGTTGTGCCGGCGATTCACCCAGACCGTGACCTTTTTGCGTTAGTGAAGTCATTTTCCTCCGGTGTCATCCTCGCCACCGGTTACATGCACGTATTGCCGGACTCATTCAATGACCTCATGTCGGACTGCTTGCCGGAAAATCCGTGGCACAAGTTCCCATTCACTACATTTATCGCTATGTTTTCCGCTGTTTTCACCCTCATGGTGGACTCTTTCTCCAACAGTTTCTTTAAGAAGAGAATCCCTGCTGCTTCTTCTACTACTACTAGTGATCTTCCCGAGAAGAACATTGAAGTTGATGGTGGTTGCTGCAATAAAGTGAATAAAGAATTGGAATTGCTTAGTCACAGTCACACTCACGGTGATGTGATTGAACACGGAAATGGAAACATGAAAGTTGTCAGTGCAGAACAGTTGCTACGCTATCGTGTTATCGCTCAGGTGTTGGAGCTAGGGATTGTGGTGCACTCAGTGGTGATTGGTTTAGGGATGGGAGCTTCAGATAATCCATGCACAATTAGGCCTCTCATTATAGCACTTTGCTTCCATCAATTCTTTGAGGGAATGGGTTTAGGAGGCTGCATACTTCAGGCAGAGTATGGGATGAAGATAAAGTCTATTATGATATTCTTCTTTTCCGTGACAACTCCATTTGGAATTGCATTGGGGATAGCTTTGTCAAAGGTATACACTGAGACAAGTCCAGCCTCACTCATAGTGGAAGGTGTTTTGAATGCTGTGTCTGCAGGGCTTCTCAATTACATGGCATTAGTAGAATTATTGGCCACTGATTTTATGGGCCCAAAGCTTCAAAGTAGAGTGAAACTTCAAATTTGTTCTTATGTTTTCGTTATGCTCGGAGCAGGAGGCATGTCA 1083 0.446 MNSNLLYKIIIIISFLAITTCPVASAEKCSSNHQGACHNRSEALKYKIIAILAILAMSMIGVTLPMLSRVVPAIHPDRDLFALVKSFSSGVILATGYMHVLPDSFNDLMSDCLPENPWHKFPFTTFIAMFSAVFTLMVDSFSNSFFKKRIPAASSTTTSDLPEKNIEVDGGCCNKVNKELELLSHSHTHGDVIEHGNGNMKVVSAEQLLRYRVIAQVLELGIVVHSVVIGLGMGASDNPCTIRPLIIALCFHQFFEGMGLGGCILQAEYGMKIKSIMIFFFSVTTPFGIALGIALSKVYTETSPASLIVEGVLNAVSAGLLNYMALVELLATDFMGPKLQSRVKLQICSYVFVMLGAGGMS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01941 361 TIGRFAM zip: ZIP zinc/iron transport family 29 361 IPR004698 GO:0005385|GO:0016021|GO:0071577
Aip01g01941 361 PANTHER ZINC/IRON TRANSPORTER 17 361 - -
Aip01g01941 361 Pfam ZIP Zinc transporter 45 361 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aip01g01941 361 PANTHER ZINC TRANSPORTER 7 17 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01941 Aip-Chr1 103590596 103593592 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01941 10 361 Inorganic Solute Cotransporters AT1G31260 52.646 6.21e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01941 K14709 - gmx:100784872 431.024