Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01936 ATGAGCTCCTTCAGAGACGATGCAACAGGGGTGGCTAATGGTGAGGCAACAATGGAAGATAAATGCAAAGTGGAAAAAAGGACATTGGAAGGGTTGAACGAAGAATCGGAAGATAAAATTGAGGAAGGCATAGGGTTGACTAGTTCTGAGGAGGATGCATCTGATTACGAAGATGTTGCCAGAATAGGTGCGGAAGAAATATGTAAGAAAATATTTCGCATTGAGCAACATGTATATGAGCTCTATACTAAATTTGGCAAATGGCATGGATTTGGTGTCCGCAAGGGAGATTATGGAAAGGATGAGAAGGGTATGATAACTATGAGGAGGTTCTTTTGTAATAGGGTAGGGCTAAGAGATGAAAAATATTGCAACAGGATTGACAAAATAAGATCGCACAGGTCAGAAACTCGAACAAACTGCCAGGCGAAGCTCTCTATATACCTGGATAAGAATAGTACGCGGTGGAGGGTAGAAAAAGTTGTTTTGGAGCATAATCATGACTTGACCCCGAAGGGTATGGTTCATATGATACCTCAATTTCGAGGTATTAGTGAGGTAGCAAAGGATCATATTGATGTGCTTGACGAGAGCATCCCTTCGTACACGTGGCTTCTCCAGAACTTGCTGGAGGTGATGTGCCACAAGTCCCCATCCGTTGTTGCTACTGATGGGGATGATGCAATGATTGCCGTGTGGTTGTATGGAGATTTGGAGGTTGCAGACTTTGAGGATGAATGGGCTGAAGCAGTTCAGGTGTACGGCTTGGAGGACAAGCTGTGGGCGATGCAGATGTACGACAAAAAGGAAATGTGGGTAAACGCATACTTAAAAAGGAAATTTTGCGCTGGATATCGAATGACGTCTAGATGCGAGGGGATAAACTCACGCGTGAAAAAGTTCCTTACCTTGAGGCACAGCATTCTAGATCTCGTACAAAACTTAGAGTACCGGAACAACAAACTACTTGCTCAATTTAACTCGATATATAACATGCCGGTGATGATAAGTTGCTTGGACCCTGTTGAAAGGTGTGCGACAGCCGTATACACAAGAGCTATTTTCAAGGATGTGAAGAAAGTGATTGATGTTGTCTGA 1098 0.4335 MSSFRDDATGVANGEATMEDKCKVEKRTLEGLNEESEDKIEEGIGLTSSEEDASDYEDVARIGAEEICKKIFRIEQHVYELYTKFGKWHGFGVRKGDYGKDEKGMITMRRFFCNRVGLRDEKYCNRIDKIRSHRSETRTNCQAKLSIYLDKNSTRWRVEKVVLEHNHDLTPKGMVHMIPQFRGISEVAKDHIDVLDESIPSYTWLLQNLLEVMCHKSPSVVATDGDDAMIAVWLYGDLEVADFEDEWAEAVQVYGLEDKLWAMQMYDKKEMWVNAYLKRKFCAGYRMTSRCEGINSRVKKFLTLRHSILDLVQNLEYRNNKLLAQFNSIYNMPVMISCLDPVERCATAVYTRAIFKDVKKVIDVV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01936 365 MobiDBLite consensus disorder prediction 28 46 - -
Aip01g01936 365 Coils Coil 15 35 - -
Aip01g01936 365 MobiDBLite consensus disorder prediction 28 52 - -
Aip01g01936 365 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 234 362 IPR031052 GO:0006355
Aip01g01936 365 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 66 189 IPR031052 GO:0006355
Aip01g01936 365 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 194 230 IPR031052 GO:0006355
Aip01g01936 365 Pfam FAR1 DNA-binding domain 81 170 IPR004330 -
Aip01g01936 365 PANTHER OS02G0262500 PROTEIN 66 189 - -
Aip01g01936 365 PANTHER OS02G0262500 PROTEIN 194 230 - -
Aip01g01936 365 PANTHER OS02G0262500 PROTEIN 234 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01936 Aip-Chr1 103442443 103444050 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01936 FAR1 9e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01936 - - adu:107465152 208.764