LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip01g01933	ATGAGCTACTTCTTCTTTCTTCTGCTGTCGGTGCCGGTCGCATCGCACGAGCCCCTCCGGCGCCATTGGCATCGCGTAGCTCCCTTCGTCACATCGTTGCAGAGCCCTCTCTGCCGCTTTCGTCGCACGTCTGCCCCCTTCATCGCCATCGTCGCAGTGCTCTCTCTGCCACACAAGTTATCTTTTCAACAACTATTGTTCATGAGTTTATATTCTAGTAGTGGTGGTGCAGCTTCTAGTAGTGGCCATCATCAACATCAACATCAACATAAACATCATCATCATCAAGTAGTTGAAGAGGTTTCAGTGCAAAGGGTGAAGAAGGAGGAGGTTAATGCCAAGATATCAGCATGGCAGAACAATAAGATTGCAAAGATTAACAACAGATTCAAGAGAAAAAATGCTATCATCGAAGGCTGGGAGAGTGAGCAGACAAATAAGCTCTATCAGCTATTGAGTAATAATCCTATTGCCTTCTGCTTGCTTGTAGCCTGGGTTGGTTCTCTCTCTAAATTTTCACTCCCTGAACTACTTAATGCTTCTAATAGCAATGAACAACATGACATGGAGATCAATTCTGCTCGTGTTGCAGTAGAGGAAGATGTGGCAAAGAACAGCAAGGATCTCTTTGAGCAGTTTGATGGCCATGAAAATAATTTCTTGATTGTGCACCCAGATATTCTGCTGTCTGGAACAAGGGTTGCTGGCAGTTTTGGTTGCCTTAGGAGAACTGTCTTAGATGAGAGGCTAAAATGCAATGAGTATTCTACTGCAGCATTGACTGGAACCTTGCTTCACCAAATTTTTCAGGCTGGGCTTACAGAAGACAATCCATCTATTGACTTTAATCTAACCGATTCGTTTTATCCATTAGTTTGGATCTTAGAAGAATTGAACAAGTCGCCAGGAGAAAGAGAAAACATTGAATGGATCTTAGAAGAATTGAACAACTTTAACTCAGTTTGGCCTTAA	972	0.4311	MSYFFFLLLSVPVASHEPLRRHWHRVAPFVTSLQSPLCRFRRTSAPFIAIVAVLSLPHKLSFQQLLFMSLYSSSGGAASSSGHHQHQHQHKHHHHQVVEEVSVQRVKKEEVNAKISAWQNNKIAKINNRFKRKNAIIEGWESEQTNKLYQLLSNNPIAFCLLVAWVGSLSKFSLPELLNASNSNEQHDMEINSARVAVEEDVAKNSKDLFEQFDGHENNFLIVHPDILLSGTRVAGSFGCLRRTVLDERLKCNEYSTAALTGTLLHQIFQAGLTEDNPSIDFNLTDSFYPLVWILEELNKSPGERENIEWILEELNNFNSVWP	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip01g01933	323	Pfam	DNA replication factor Dna2	214	279	IPR014808	-
	Aip01g01933	323	Pfam	Remorin, C-terminal region	110	152	IPR005516	-
	Aip01g01933	323	PANTHER	OS02G0116800 PROTEIN	35	147	-	-
	Aip01g01933	323	PANTHER	REMORIN 4.2	35	147	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip01g01933	Aip-Chr1	103101735	103105776	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip01g01933	205	281	Core DNA Replication Machinery Family	AT1G08840	59.524	8.94e-27	109

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip01g01933	K10742		-	tcc:18585710	112.464