Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01932 ATGCCGCCACACCTCTTCGCTTTGCTGCTACCGCGTCGTTGCTCTGCTGCTCCCGCACCCGTCGTCGCCCCGTCACACTCGCGCCGCCGTCCCTCCGTCCCTGTTTCAAATCGAAAACACGTAGTAGCACCTCCTTCTCCACATGAATCTCCAGTTGCAACTTCAGCTAATAGAGCATTACCAATGGCACCACCAGGCATAGAAGTTGGGCAGCCCAATGACAGTCTGTTGCCTTCAAAGGGGGGAACGACATTGCCATTGGATAAATCTTCCCGAACACTAGAGTTTGATAATAAAATGCCAAATGGAAAGCCGAAGAATAAGGTTGTTCATCCTGAGAGTCCTATAATTGATATTGTTGTTGCTCTTGACAGAAGCAAGCTGAGAAAAGTTTCAGAACGGGTTATTTCTCCAAAACCACCCAAGTTAGATGAAAGAAATTCATTGTTAGAGAAAATAAGATCAAAGTCTTTCAACTTAAGACCTACTGCAGCTACACGACCCATCATGGAGGGTCCAAAAACAAATTTGAGGGTTGCTGCCATCTTGGATAAAGCAAATTCAATTCGCCAGTATGTTGATGACCATAGGGCTGGAAAAATTTTTGTCAAATTGAACAGCAGGCTTAACAAGTGTGGTGTAATCAGTCCCCGATTCGATGTCGGCGTTAAAGAGATCGAAAGTTGGACTGTTAGACTCCTCCCCTCAAGACAGGATCTTCTTTCTGCCACTGATGCATATGGTTTTTGGCTTTCTATATTAAAGAGTACTTGGTCACAGTGGAAGTGGATTGCAACCTAA 801 0.4519 MPPHLFALLLPRRCSAAPAPVVAPSHSRRRPSVPVSNRKHVVAPPSPHESPVATSANRALPMAPPGIEVGQPNDSLLPSKGGTTLPLDKSSRTLEFDNKMPNGKPKNKVVHPESPIIDIVVALDRSKLRKVSERVISPKPPKLDERNSLLEKIRSKSFNLRPTAATRPIMEGPKTNLRVAAILDKANSIRQYVDDHRAGKIFVKLNSRLNKCGVISPRFDVGVKEIESWTVRLLPSRQDLLSATDAYGFWLSILKSTWSQWKWIAT 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01932 266 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 59 193 - -
Aip01g01932 266 PANTHER WASP-1 59 193 IPR028288 GO:0005856|GO:0030036
Aip01g01932 266 Gene3D - 210 241 - -
Aip01g01932 266 SUPERFAMILY Ribosomal protein S8 174 237 IPR035987 GO:0003735|GO:0005840|GO:0006412
Aip01g01932 266 MobiDBLite consensus disorder prediction 18 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01932 Aip-Chr1 103016393 103019388 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01932 165 238 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 60.256 5.40e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01932 - - ahf:112743748 241.506