Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01926 ATGGTTCAAAAACCACTGCAAAACAAAGCAACTAACCCAAGAATAATGGTTGTGATGAACCCAATCTTGGCACTCTCCATTATTACTACCATTTTATTCTTCTCTCCAATGGCTTATTCAGAGAGCAAAGTGGTGAAGAGCGCATTGGTGAGATTCATGGACAATCTTGCACCATGGAATAATAATTCAGAGAGAGAAGCACCAAGGTACTGGGGATGGAACCTTGACACAGATCCATGCGCAGATAACTGGAAAGGTGTGAGTTGTTCCTCAGATGGAAGTGTGAAAGCCATTGTTCTTGATGATTCAAACCTGAGTGGAACCCTAGACGCCACCTCTCTCTGCATGGCGAAATCTCTTCAAATTCTGAGCCTGAAGAGGAACAACTTGCAGGGATCAGTGCCCGAAGCTATCGGAAACTGCAAGTATTTGACCCGTTTGTTCCTCAGCGATAACAACTTCTCCGGTGATCTTCCGATTTCTCTTCAACATTTATGCAGCTTGAGGTGGCTTCATGTTGCCAGAAACAACTTTACCGGTCCCATTTCCGATAAGATACCTGCCTCAGTCTTGATATCCTTTCTCGGTGAGAATAACAAGTTCACTGGGGAGGTACCTGATTTTGACTTCACGAAACTCATTCAATTCAACGTCTCCAACAACAACTTGAAGGGTCAGATTCCTGACGTGAGAAACAAGTTTGGTGTGGAAAGCTTTTTTGGAAATCCTGACTTGTGTGGATCGCCGCTTCCAGCGGCGTGTCCACCTAGTCCCTCACCAAGGAAAGAAAAAAGACTATTTATCACCGACGGCGTGGCGATTTACTCTGGCTACATCATTCTTGGCATCACCGTGGTGGCATTCTTTGTGTACAAGCTAGTGAGGAAATCCATGAACAAAGTGGAAGCATCCAAGGCTCTCAACAAGAAGGAATGCCCAAGGCATCGATTAACTCGTAAGGATCCTGCAGGAGGCAATAATGGTGAAAAGAGCAGAGAGGATTCTTCTGAGAGCAAGGGCCGTGGCAGCGTTGAGATGAGATCAGAGCCATCGATAGCATCACTTGAGAGTGGAATAACATTGAGCACATCAACGCTGGTAGTTCTGTCAAGCAGGGTATCAAAGGCGCTGAGGTTTGAGGACTTGCTGAGAGCACCAGCTGAGTTGATTGGGAGAGGGATGCATGGGAGCCTCTACAAGGTGATGCTGGACAACGGTGTGTTCTTGGCCGTGAAGAGGATCAAGGATTGGGGAATCTCCGAAAGTGATTTTCAGAGGAGAATTGGGAAAGTTAGCCAAGTCAACCATCCATTTGTGTTGCCACCTCTTGCTTACTATTGTTCCCGCCAAGAGAAGCTTCTTGCATATGAGTACATGGACCATGGGAGTCTCTTCAACATGCTCTACAAAGTTGGATCACAAAATGGAAAACCCTTTGAGTGGGGAAGCAGACTAAACATTGCTGCAAAAATAGCAGAAACTTTAGCTTATATGCATGAAGAACTACGAGAAAGTGGAATAGCACACGGCAACTTAAAATCAAGCAACATTTTGTTCAACAACAACATGGAACCATTAATAAGCGAATATGGGCTAATGGTAATTGAACACCAAGCTCTGAGATCACTCTCTCACAGCAAGAGTGTGAGGAACAGGGTTCTAACTGCTGCACATGCATATAGCACCTTCAAAGTTGATGTATACGCCTTTGGGGTGATACTCTTGGAGCTTCTCACAGGGAAAGTGGTTCAGAATCAAGGGGTTTTTGATTTCGTAAAGTGGGTTAATTCTGTGGTTAGAGAGGAGTGGAGTGTTGAAGTGTTTGATAAGAACTTGGTGTCAGAAGGTGCGAGTGGAGAGAGGATGATGAACTTGTTGCAGGTTGCATTGAAATGCATCAATCCTTCTCCTGCTGATAGACCAAGCATGAGTGAAGTTGCATTGGCCATAGTTGCATTGAAAGAGGAGGAGGAAAGATCTTTAACATAG 1989 0.449 MVQKPLQNKATNPRIMVVMNPILALSIITTILFFSPMAYSESKVVKSALVRFMDNLAPWNNNSEREAPRYWGWNLDTDPCADNWKGVSCSSDGSVKAIVLDDSNLSGTLDATSLCMAKSLQILSLKRNNLQGSVPEAIGNCKYLTRLFLSDNNFSGDLPISLQHLCSLRWLHVARNNFTGPISDKIPASVLISFLGENNKFTGEVPDFDFTKLIQFNVSNNNLKGQIPDVRNKFGVESFFGNPDLCGSPLPAACPPSPSPRKEKRLFITDGVAIYSGYIILGITVVAFFVYKLVRKSMNKVEASKALNKKECPRHRLTRKDPAGGNNGEKSREDSSESKGRGSVEMRSEPSIASLESGITLSTSTLVVLSSRVSKALRFEDLLRAPAELIGRGMHGSLYKVMLDNGVFLAVKRIKDWGISESDFQRRIGKVSQVNHPFVLPPLAYYCSRQEKLLAYEYMDHGSLFNMLYKVGSQNGKPFEWGSRLNIAAKIAETLAYMHEELRESGIAHGNLKSSNILFNNNMEPLISEYGLMVIEHQALRSLSHSKSVRNRVLTAAHAYSTFKVDVYAFGVILLELLTGKVVQNQGVFDFVKWVNSVVREEWSVEVFDKNLVSEGASGERMMNLLQVALKCINPSPADRPSMSEVALAIVALKEEEERSLT 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01926 662 ProSiteProfiles Protein kinase domain profile. 384 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01926 662 Pfam Leucine rich repeat 119 178 IPR001611 GO:0005515
Aip01g01926 662 SUPERFAMILY L domain-like 74 231 - -
Aip01g01926 662 MobiDBLite consensus disorder prediction 304 344 - -
Aip01g01926 662 SUPERFAMILY Protein kinase-like (PK-like) 388 647 IPR011009 -
Aip01g01926 662 Gene3D Ribonuclease Inhibitor 45 192 IPR032675 -
Aip01g01926 662 MobiDBLite consensus disorder prediction 304 351 - -
Aip01g01926 662 ProSitePatterns Protein kinases ATP-binding region signature. 390 412 IPR017441 GO:0005524
Aip01g01926 662 Gene3D Ribonuclease Inhibitor 193 257 IPR032675 -
Aip01g01926 662 PANTHER LRR RECEPTOR-LIKE KINASE 27 661 - -
Aip01g01926 662 Pfam Protein kinase domain 388 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01926 662 Gene3D Transferase(Phosphotransferase) domain 1 459 661 - -
Aip01g01926 662 Gene3D Phosphorylase Kinase; domain 1 360 458 - -
Aip01g01926 662 PANTHER OS05G0588300 PROTEIN 27 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01926 Aip-Chr1 102828418 102832039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01926 69 646 Receptor kinase-like Gene Family AT1G48480 34.375 4.81e-91 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip01g01926 Pkinase 2.7e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01926 - - adu:107492411 1261.13