Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01916 ATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTGCGTAATTATGCGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCAAAGTTGTTGCCGGGCGAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTTGTTTCGTTCTACGAAGAGCACTCTCATGGATTAGTTGATCCACTCGATGTTAGCATGATGCTTGAGTATCGCACATTCAGTGTCTCGGATAAAGCTCAGGCGAAGAATTTGCACGACATAGGCATCAGGACCTGTCACATTTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCAAACTTGTCATTCAACCAAAAAGATATGTACAACCTCATTACTCAACATAGGAAGGAAAAGGTGCAGGGTGGTGATGCAAATGCTGTAATAAGCTACCTGAGAGGTAAAGATGGGAATGATTCTTATTTCTTTGGCAAGTACACATTAAGTAATGAGAATCAATTGGAAAATTTGTTTTGGGCTGATGGGACTAGCCGTATTGATTATGAGTGCTTTAGGGATGTCTTGACATTTGATTCGACTTACAATAGGAACGTCTAA 648 0.4259 MHGFAVRLDEVRRDSDGCVIMRQIVCNRAGSRKEEVEKDERIRDHRPLTQSCCRARIRARLDRKIHKWKVVSFYEEHSHGLVDPLDVSMMLEYRTFSVSDKAQAKNLHDIGIRTCHILGYLAAQKGGYANLSFNQKDMYNLITQHRKEKVQGGDANAVISYLRGKDGNDSYFFGKYTLSNENQLENLFWADGTSRIDYECFRDVLTFDSTYNRNV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01916 215 Pfam FAR1 DNA-binding domain 2 82 IPR004330 -
Aip01g01916 215 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 214 IPR031052 GO:0006355
Aip01g01916 215 PANTHER OS02G0262500 PROTEIN 2 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01916 Aip-Chr1 102691637 102692284 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01916 FAR1 1.5e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01916 - - aip:110268388 397.512