Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01907 ATGACTGTTGATTTGGTTGTAGCTTCTCCTGTGGAGGATTACTTTTTATACATTGATGATCTGAAAAATCCTGATAAAGAAGAAGTTGAGAAAATTACACAACCATATTTAGATGCTCTTGGTGAAGACTATTCTGTTTGTTGCCAAGGAACTGCTTTTTTTCCTTTGCAAAGCTGCATGAACCATTCCTGTAGTTCTAATGCCAAAGCCTTCAAGAGAGACGAGGATAGGGATGGCCAAGCAACCATAATCGCAGTAAGGCCGATTCGAAAAGGAAAAGAGAGGACTCATGAGGCTGTAAATGAGAAAAAGTCCAAACATATTTCTGCAGCAGTGTCACTAATCAGTAATGCTTCTAATAGCAATGAGCAACATGGCATGGAGATCAATTCTGCTCGTGTTGCAACAGAGGAAGACGTGGCAAAGAACAGCAAGGATCTCTTTGAGCAGTTTGATGGAAAAGATACTAATGCTACTGATATGGGAAAGAAGGGTAGTTGGTTCTATAAAGAAATGATGGAGTCGCTTTTTGGATATAATGCTACTCAAGAAAAATCTAAACCCGGAATGAAGAAAGAATCTCATGAACAAACTCCTCAATATATTCAGATACCATGTAGTAGTGCTTTGTGTTTGTTGAAGAGAAGGATGTATGGTGTGGCCCTGGAATTGGATTCGCATCAGATCATGCTTCTGCTTCTGTGGATTGTGTGGTGGCAAGGAAGAATACTTCTTCAAGAAGGAACCTTGATGCTGTTGAGAGAGCAACACATAGGGAAGAGACATTGCATTTTCATGTTCATATAA 807 0.3965 MTVDLVVASPVEDYFLYIDDLKNPDKEEVEKITQPYLDALGEDYSVCCQGTAFFPLQSCMNHSCSSNAKAFKRDEDRDGQATIIAVRPIRKGKERTHEAVNEKKSKHISAAVSLISNASNSNEQHGMEINSARVATEEDVAKNSKDLFEQFDGKDTNATDMGKKGSWFYKEMMESLFGYNATQEKSKPGMKKESHEQTPQYIQIPCSSALCLLKRRMYGVALELDSHQIMLLLLWIVWWQGRILLQEGTLMLLREQHIGKRHCIFMFI 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01907 268 Pfam SET domain 46 94 IPR001214 GO:0005515
Aip01g01907 268 SUPERFAMILY SET domain 40 94 IPR046341 -
Aip01g01907 268 Gene3D SET domain 23 98 IPR046341 -
Aip01g01907 268 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 3 104 IPR044237 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01907 Aip-Chr1 101797073 101800842 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip01g01907 SET 5.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01907 - - aip:107613919 185.652