Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01901 ATGCTCAACCAGAAGTTCTCCCTCAATCATAGCGTTTCGATGGGGCCTACTGAGATCCCTTCTCAGTCAACAGAGACTATTAAGATTCCTACCGCTAACTATGAGTTTGGTGCAACCTTCATTGATCATCCCAAGTTGATGTTGTTGGGGAGAATATTGACTGATGGAAGGCTCAATGCAAGAGTCAAGTGCGACGTCTCTGAAAATCTCACTCTTAAAGCTAATGCTCAGCTTACGAATGAGCCACACATGTCTCAAGGGATGGTCAACTTTGATTACAAGGTATATGTGGATGGAACAACTACCATATCTACTCATGAAAGGAAAGCTAGCATTAGAGAATTCTATGCGGTAATTTATCCGTCTTTGTTACAACTTCAGAAAGGGGTTACAGATTCAGAGGATAAGAAACAGAAAGCTGTTTGTATGGAGAGGAAGCTTGCAGACAAGATTGCAGCTTCTGGTTACTATGTGGTTGTTCCGGACTTCTTTTATGGTGAACCCTATGATCCTCAGAATACTAATAGACCTTTAGGAGAGTGGCTAAAAGATCATGGAATGAACACTAGGAAGAACAAGAAGTGCAGAAGGAGGAACACTGAAAAAAGCAGCATAACATGTCACCATAAACATGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGGATGTATGGTGTGGCCCTGGAATTGGATTCGCATCAGATCATGCTTCTGCTTCTGTGGATTGTGTGGTGGCAAGGAAGAATGCTTCTTCAAGAAGGAACCTTGATGCTGTTGAGAGAGCAACACATAGGGAAGAGATCGGATATAGTAAGGTAGACATCCTCTGCTCAGAAAGTGGGAAGCAGCGAATAATTTTGATGGACCAAGAATCTCAAGAAGCAAGTATATTGCCATCATCACTAAAAAGCTCAAGAAAGAATGAAGCTATCCATAAATTAGGATATTGA 972 0.4126 MLNQKFSLNHSVSMGPTEIPSQSTETIKIPTANYEFGATFIDHPKLMLLGRILTDGRLNARVKCDVSENLTLKANAQLTNEPHMSQGMVNFDYKVYVDGTTTISTHERKASIREFYAVIYPSLLQLQKGVTDSEDKKQKAVCMERKLADKIAASGYYVVVPDFFYGEPYDPQNTNRPLGEWLKDHGMNTRKNKKCRRRNTEKSSITCHHKHASSSSSSSSSSSSSSSSQDVWCGPGIGFASDHASASVDCVVARKNASSRRNLDAVERATHREEIGYSKVDILCSESGKQRIILMDQESQEASILPSSLKSSRKNEAIHKLGY 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01901 323 MobiDBLite consensus disorder prediction 209 225 - -
Aip01g01901 323 Pfam Eukaryotic porin 2 94 IPR027246 GO:0005741|GO:0055085
Aip01g01901 323 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40-1 2 95 - -
Aip01g01901 323 PANTHER MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 2 95 IPR037930 GO:0005741|GO:0008320|GO:0030150
Aip01g01901 323 MobiDBLite consensus disorder prediction 175 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01901 Aip-Chr1 100829725 100833796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01901 215 265 C3H Transcription Factor Family AT1G73760 43.636 9.61e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01901 K11518 - adu:110279477 222.246