Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01879 ATGCAGTGCCTCACCACAACAACAACCACCTCTCATCCCTCAAATCCTTCTTCATCCCCTCCTCCTCCGCCCAAAATTGTTGATGGTGTTTGGAAAGACATAATCCTAACCCATTCTCGCAGAGACCCACCTCACCATAATCAGCACTCTTTCGAGGAAATGACTCTTGAGGCTATCCTCTCAAAAAACGCTGTCGTCACTGATGACAACTTCATCGCTGTTGTTTCTCTTTATAATCATCATCCTGTTCCTCATCAGTTTCTTAGTTGTCTCACGGCTTGCTCAGAATCAAAATCAATCATCCCCATTCAGAGTTCAGAGCTTGAGCTTCAATGGCGACGAAGATGCAGAATGATGATAACACCAAGAAGGCGGGCTTTACTCACTAGTGCCCCCCCAGTCCCCAACCTTCGTTCTCACCGTCGAAGAAGTCGTACGCTCGCCGTCGTTCTCACCCTCAAGCAGCCGACTCGTTTTCGCCCTTCCCTCAACTCCCCTTTTCTAGCAAAACACTATGCCGAGTTTGAACTTGGCACTGGTGGATTCTCCGAGGCCAACTTCCTGGCTGAGGGGGGATTTGGATCCGTTCACAGAGGGGTTCTACCAGATGGACAAGTCGTTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAGTTTTGCTCAGAGGTAGAAGTCCTGAGTTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGATTCTGTATAGAGGATAAGAGAAGGCTACTAGTTTACGAGTACATATGCAATGGATCATTGGATTCACATTTATATGGGAGACAGCGAGAACCATTAGAATGGGCTGCACGGCAAAAAATTGCCATTGGAGCTGCTCGTGGGTTACGATATCTTCATGAAGAGTGTAGAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACATTTGA 942 0.4745 MQCLTTTTTTSHPSNPSSSPPPPPKIVDGVWKDIILTHSRRDPPHHNQHSFEEMTLEAILSKNAVVTDDNFIAVVSLYNHHPVPHQFLSCLTACSESKSIIPIQSSELELQWRRRCRMMITPRRRALLTSAPPVPNLRSHRRRSRTLAVVLTLKQPTRFRPSLNSPFLAKHYAEFELGTGGFSEANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWAARQKIAIGAARGLRYLHEECRVGCIIHRDMRPNNI 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01879 313 Gene3D Phosphorylase Kinase; domain 1 148 257 - -
Aip01g01879 313 PANTHER OS01G0253100 PROTEIN 163 313 IPR045271 GO:0004714|GO:0006468
Aip01g01879 313 Pfam Protein tyrosine and serine/threonine kinase 187 313 IPR001245 GO:0004672|GO:0006468
Aip01g01879 313 SUPERFAMILY Protein kinase-like (PK-like) 156 313 IPR011009 -
Aip01g01879 313 Gene3D Transferase(Phosphotransferase) domain 1 259 313 - -
Aip01g01879 313 ProSiteProfiles Protein kinase domain profile. 182 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01879 313 SMART tyrkin_6 182 313 IPR020635 GO:0004713|GO:0006468
Aip01g01879 313 MobiDBLite consensus disorder prediction 1 24 - -
Aip01g01879 313 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 163 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01879 Aip-Chr1 96596302 96599760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01879 172 313 Trihelix Transcription Factor Family AT1G23540 53.521 5.76e-46 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip01g01879 PK_Tyr_Ser-Thr 8.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01879 - - ahf:112783851 333.954