Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01877 ATGGCTGTTGCACGGAATGCAAACCAACGATTGATGTTGACTGGGACACCACTTCAGAACGATTTACATGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAGAAAGCTGATGTTTATTCATTTGGGGTGGTATTGGTGGAGCTTGTTACAGGGAGAAAAGCTGTGGATCTCACGCGGCCTAAGGGACAGCAGTGTCTCACTGAGTGGACACGATCTCTGTTGGAAGAATATGCCATTGAGGAACTGATTGATCCAAGGCTGGGGAACCAATACTTAGAAAATGAGGTATATTGCATGTTGCATGCTGCATCATTATGCATACGGCGAGATCCTCATTCCAGACCACGCATGTCACAGGTTCTTCGTATACTGGACGGCGACATGGTCATGGACGCAAGTTACATTTCAACTCCAAGTTATGATGTGGGAAACCGGAGTGGCCGACTCTGGTCGGTGCCGCTGCAGAGGCAGCACCATTACAGGGGTCCTCTGTTAGAGGTGTCACTTGAATCATTCGGTGGGAAGCTATCTCTTGACAAATAG 630 0.4825 MAVARNANQRLMLTGTPLQNDLHVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWTRSLLEEYAIEELIDPRLGNQYLENEVYCMLHAASLCIRRDPHSRPRMSQVLRILDGDMVMDASYISTPSYDVGNRSGRLWSVPLQRQHHYRGPLLEVSLESFGGKLSLDK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01877 209 Gene3D Transferase(Phosphotransferase) domain 1 9 165 - -
Aip01g01877 209 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 24 186 - -
Aip01g01877 209 ProSiteProfiles Protein kinase domain profile. 1 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01877 209 SUPERFAMILY Protein kinase-like (PK-like) 21 165 IPR011009 -
Aip01g01877 209 Pfam Protein kinase domain 19 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01877 209 PANTHER INACTIVE PROTEIN KINASE SELMODRAFT_444075 24 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01877 Aip-Chr1 96593413 96595622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01877 21 157 Trihelix Transcription Factor Family AT1G70460 54.861 8.99e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip01g01877 Pkinase 4.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01877 - - ahf:112783851 365.155