Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01853 ATGCCGAGCAATCGCAGAAGTTCAAATCCTCTCCTGCAACTCAACAATGTCTTCTTCGGAGTTTTATGTGCCAAAGCTTCAATGATGTTACAGAATGTGCCTCCAGCCATTCTTCTGAGGTTCCTGCAGGAGCATGGGTCAGAATGGGCAAGCAATAACATGGATGCGTACTCAGCTGCTGCCATTAAAGTTGGTCCTTGTAGCTTATCAGGATCTCGCGTAGGAAATTATGGGGTCAAGTTATTCTTCCTCTAG 255 0.4588 MPSNRRSSNPLLQLNNVFFGVLCAKASMMLQNVPPAILLRFLQEHGSEWASNNMDAYSAAAIKVGPCSLSGSRVGNYGVKLFFL 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01853 84 PANTHER CLASS III HD-ZIP PROTEIN CNA1 16 81 - -
Aip01g01853 84 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 16 81 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01853 Aip-Chr1 93892713 93893947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01853 21 83 Homeobox Transcription Factor Family AT1G52150 71.429 2.36e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01853 K09338 - gmx:100819365 112.079