Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01840 ATGCTACCCTCTCGATCCATTCACACTCCACACAAGTTTAGCAGGAGCTTCTTCCTCTCTCCATCCATGCTCTCTCCATCGCTCCATCCACGCTCTCTCCATCGCTTTGATAACTCAGGGCTTATTCCTCTCTCCGTCCACGCTCTCTCCATCGCAGAAGCTTCTTTCACCGCCGCCGCTCTTTCCATCGCTCCATCCCCGAAGAAGCTCTGTCACACCCCTTCCCGGATCTTCTCCGACGAGGAGAGTCTAAGGAGATGGAAGGAACAACTTCTTGGGAATGTGGATGTGAACAATGTGACAGAGGTTCTGGAACCAGAAGTGAAAATAATAAGCCTTTCAATAGTGTCACCTAGAAGAGAGGACATAGTGCTTCTAATACCTGAGAATGGGAATTCAAAGGGTCTATGGACTGAGAATCAAGATGCTATAGATGCCGCAATTGTTGGTGCTCTGTGTAGGGACTGTAGGAAACAAGTGTACTTGGGTGGATTTGACACAGCACATGCTGCAGCTAGGGCATATGATCGAGCTGCGATCAAGGTCCGTGGCATTGATGCAGATATCAATTTCAACGTCAGCGATTATGATGAAGATATAAAGCAGATGAGTAACTTTACAAAGGAAGAGTTTGTGCATATTCTGCATAGGtga 654 0.4709 MLPSRSIHTPHKFSRSFFLSPSMLSPSLHPRSLHRFDNSGLIPLSVHALSIAEASFTAAALSIAPSPKKLCHTPSRIFSDEESLRRWKEQLLGNVDVNNVTEVLEPEVKIISLSIVSPRREDIVLLIPENGNSKGLWTENQDAIDAAIVGALCRDCRKQVYLGGFDTAHAAARAYDRAAIKVRGIDADINFNVSDYDEDIKQMSNFTKEEFVHILHR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01840 217 Pfam RHO protein GDP dissociation inhibitor 62 134 IPR000406 GO:0005094|GO:0005737
Aip01g01840 217 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 154 217 - -
Aip01g01840 217 ProSiteProfiles AP2/ERF domain profile. 132 192 IPR001471 GO:0003700|GO:0006355
Aip01g01840 217 SUPERFAMILY DNA-binding domain 156 194 IPR016177 GO:0003677
Aip01g01840 217 PANTHER AP2 DOMAIN TRANSCRIPTION FACTOR 154 217 - -
Aip01g01840 217 SMART rav1_2 150 198 IPR001471 GO:0003700|GO:0006355
Aip01g01840 217 Gene3D AP2/ERF domain 130 194 IPR036955 GO:0003700|GO:0006355
Aip01g01840 217 SUPERFAMILY E set domains 63 127 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01840 Aip-Chr1 91966382 91968501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01840 155 217 AP2-EREBP Transcription Factor Family AT2G39250 69.841 1.11e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01840 K09284 - aip:110271490 184.496