Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01818 ATGAGATTTCCTCTGTCACTTGCATCTCTTTGGCTGCTAAAGTTGAAGAAAATCAAGTGCCTCTTCTCTTGGACCTTCAAGGCATATGATAGAGCTGTGATCATGTTCCGTGGCATTGATGTAGATATCAATTTCAATGTCAGCGATTGTGATGAAGATATAAAGCAAAATATATTCGTGCCTTTCCTCCGAGTCTCGTGCTTCTGTGTAAATATTTTTGCCTTGTTCATGTTGTTCTCAATCTTTGTCAGGTCCCACGAGGAAAAACGATCTGCTTATGCACCCCAATTCGGAGTGAGAAAGAGGAGAAGCGAAGGTGGGCGCACCTTGCGAGCACAGAAGAATGTTATGAAATGCCCTTCATGTTCAATTGACATAGCTGAATTTCTTCAGAACCCAGAGGTTAACAGACACATGATGAGCGCGATAGAAACCCTCCTCCGCGAGGCTGAGATAGAAGAGAGTTCTGAAGTGTCCAATGACAAAAATAATGAAAATATAGAGACTGTGAATGATGATGATGGGACAGAAGTTTCAAAGCATTGTGATTCAGGTGAGAATGTCCTAGAGGAGATCAAGGACAATGATTTGAATCAGCCACACAAGCGCAGAAAGGGTACTGGTGATTCAGCTATTGTGAACAGTGAGGAGCAAATCGATGTGGCAATAGATTAG 675 0.4237 MRFPLSLASLWLLKLKKIKCLFSWTFKAYDRAVIMFRGIDVDINFNVSDCDEDIKQNIFVPFLRVSCFCVNIFALFMLFSIFVRSHEEKRSAYAPQFGVRKRRSEGGRTLRAQKNVMKCPSCSIDIAEFLQNPEVNRHMMSAIETLLREAEIEESSEVSNDKNNENIETVNDDDGTEVSKHCDSGENVLEEIKDNDLNQPHKRRKGTGDSAIVNSEEQIDVAID 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01818 224 Coils Coil 223 224 - -
Aip01g01818 224 MobiDBLite consensus disorder prediction 153 210 - -
Aip01g01818 224 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 92 210 IPR045134 -
Aip01g01818 224 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 92 210 - -
Aip01g01818 224 MobiDBLite consensus disorder prediction 153 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01818 Aip-Chr1 87798690 87800669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01818 101 156 C2H2 Transcription Factor Family AT5G39550 53.571 3.85e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01818 K10638 - aip:107608745 219.55