Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01816 ATGTTTTCCTTGGATTACTGCCATGGCTTCTCTCTCTCCATCGAAGATTTGACGACCTCCGCTGTCGCGCCACCACCGCCGCTCGCGTCGCACAAGCTCCCTCCACCACCGCTCTCATCGCGTTTGCTCCCTTCATCACCATTGTTGCACGAGCTCTCTCCGCCGTGCTCTTGTCTTACGAGCTCCCTCTGCCGCCACTCTCGTCGCTGCTTCTTCTCTCCTCGCCGGAGGACAGTTATTGCATCAATCCATCAGCCTAGTGCTGAAGTTTTTCAATTCTTTGATAATATCTGTTTGTTCTCTGCTGGCAAAACAGTTTACATTGGACCTGCTTCTGCTGCAATTCAGTTTTTCGCTTCCAATGGTTTTCCTTGTCCTGCTCTTCAAAACCCCTCAGATCATATGCTAAAACGTATAAACAAGGACTTCGATCAGGTTGAAGATGCAAAATATGTGTTTGAGTCAAAGACTATTCAGAGAATGGAGCTTCTGATTCTGTCCACCTTGAATTGGAAGATGCATCGTGTGACCCCACTCTCAGCGATTGAAGAATAG 555 0.4829 MFSLDYCHGFSLSIEDLTTSAVAPPPPLASHKLPPPPLSSRLLPSSPLLHELSPPCSCLTSSLCRHSRRCFFSPRRRTVIASIHQPSAEVFQFFDNICLFSAGKTVYIGPASAAIQFFASNGFPCPALQNPSDHMLKRINKDFDQVEDAKYVFESKTIQRMELLILSTLNWKMHRVTPLSAIEE 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01816 184 Gene3D - 145 174 - -
Aip01g01816 184 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 76 160 - -
Aip01g01816 184 Pfam ABC-2 type transporter 84 137 IPR043926 GO:0140359
Aip01g01816 184 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 76 160 - -
Aip01g01816 184 SUPERFAMILY Cyclin-like 144 174 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01816 Aip-Chr1 87707355 87709649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01816 142 183 Core Cell Cycle Gene Families AT4G34160 73.810 7.75e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01816 K05681 - gmx:100813462 122.864