Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01814 ATGTGGCTAAGTGGTGCAGAGTCTTCGGGAAAGGAATCGATTCCAGGGTCTTTGGCTCCCGAGGAGACAGAGGAAATGAAAAATGAGGAAGAGTTAGGCGTTCTTGCTAAAGAGGATCAGAGTAGATGTGCACTGCGTGGAGAGGGCTTCGACGAGTTTTACAGGCACGAAATGAATGAGTGGATGTATAGAGGAGCCACGTACCTTAAGGCATCCGTGGGAACAACATTGGCCACCATGGACAGACATCAACTATGGCttcgatgccttgatatgtttgttgagtaa 288 0.4444 MWLSGAESSGKESIPGSLAPEETEEMKNEEELGVLAKEDQSRCALRGEGFDEFYRHEMNEWMYRGATYLKASVGTTLATMDRHQLWLRCLDMFVE 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01814 95 MobiDBLite consensus disorder prediction 1 35 - -
Aip01g01814 95 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 1 85 - -
Aip01g01814 95 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 1 85 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01814 Aip-Chr1 87156011 87156298 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01814 1 85 C2H2 Transcription Factor Family AT4G04885 51.765 7.95e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01814 K14400 - aip:107609120 159.458