Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01813 ATGCAGGGCCAAAGTTTACATTTACATGGGGGAACCTTGCCATCTTTGTGCCCATCTCATCCCCATGCTGATGCTTCGGTGACAAGTCAACCTCCACCTGTATATCTTGATTTGAATAGTTCACTAGTGAACCATGGTGTGATCTCGGTAACTAATCCACTCACCAATCCACCCACTGGACTGGTTTGTTATGAAGGTGTAATCAGTGCCTTATACATTGAGCTTCCTAGACAATGCACGAGCTGCAGTCTCTTATTCAAATGGCAAGATGAGCACAGTACACATATGGATTGGCACGTGACTAGGAACCGAATGTCAAAAAGTCGGAAGCGGAAAGGGTCTCAAAAGTGGTTTGCAAGTGGGAGCATGTGGCTAAGTGGTGCAGAGTCTTTGGGAAAGGAATCGATTCTAGGGTTGTTGGCTCCCGAGGAGACAGAGGAAATGAAAAATGAGGAAGAGTTAGGCGTTCTTGCTAAAGAGGATCAGAGTAGATGTGCACTGCGTGGAGAGGGCTTCGACGAGTTTTACAGGCACGAAATGAATGAGTGGATGTATAGAGGAGCCACGTACCTTAAGGCACCCGTGGGAATAACATTGGCCACCATGGACAGACATCAACTAGGGCCCATTGTTCATTCCAAATGCAGAAGGATCAGAGTAGATGTGCACTATGTAGAGAGGGCTTCGATGAGTTTTACAGCCACGAAATGGATGAGTGGATGTATAGAGGAGCCACGTACCTTAAGGCACCCGTGGGAATAA 762 0.4698 MQGQSLHLHGGTLPSLCPSHPHADASVTSQPPPVYLDLNSSLVNHGVISVTNPLTNPPTGLVCYEGVISALYIELPRQCTSCSLLFKWQDEHSTHMDWHVTRNRMSKSRKRKGSQKWFASGSMWLSGAESLGKESILGLLAPEETEEMKNEEELGVLAKEDQSRCALRGEGFDEFYRHEMNEWMYRGATYLKAPVGITLATMDRHQLGPIVHSKCRRIRVDVHYVERASMSFTATKWMSGCIEEPRTLRHPWE 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01813 253 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Aip01g01813 253 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 11 216 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Aip01g01813 253 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 11 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01813 Aip-Chr1 87085443 87086322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01813 5 216 C2H2 Transcription Factor Family AT4G04885 50.000 2.38e-62 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01813 K14400 - aip:107609120 449.129