Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01807 ATGTCAAAGAGATTTGAGATTCATCAAGAGAATAATGAAGGAAGTGGCGGCAAGAGTAGTAATGATAATGAGGGTGAGGAAAATTCATTTGACATGAATGAAGGAGCGGCTATAAGTGATGATGAGGAATTGGAAGAAGAGAATAATAATGAAGCAAAGGAGGAGGAGGAGGATAACAATGAAGAAGGGAATTCAGCAAACCCAAGCAGCAGCAGCACAGCATCAAGAGAAGGGAAGAGAGGGAGTGGTGTGAGACAATATGTGAGATCAAAGATGCTAAGGCTTCGTTGGACTCCTAATCTTCATCTCTCCTTTGTCCATGCTGTTCAGAGGCTTGGAGGTCAAGAAAGTAAGTCAAGAAAGCAACTTTCTGTGCAAAGCAGTTTTGCTGAAGCTGCACAACTTCTGAAGCCAGCCTCTGCTGCAATGACACGGGCTGTTGCAACAAAGGGTGCTAGGTCTGAGCCTATCTCTGTCCAAGATATAGCGCTTCAGTCTCAAGCTTTATTAAATGTTAAGGATTCAAACAAGGAACTGCTAAGCTCTGAAGATAGAGAAAGAATGGTGATTCGAAAGTTTAAGTTTGAGGACCCACGCATTGAGCAGATTCAAGATCTAGAGGTTAGAGGTGATGTCTATACATATGACTCGGGTCTTGTTGCAGGTTACTATTGCTCAACAGCTTCTCCACCTCCAACAGCTATACAAGAGTTGCGGGCAACCATTCGTGTGCTACAAACTATTCCGGATGTTGTTTAG 759 0.4321 MSKRFEIHQENNEGSGGKSSNDNEGEENSFDMNEGAAISDDEELEEENNNEAKEEEEDNNEEGNSANPSSSSTASREGKRGSGVRQYVRSKMLRLRWTPNLHLSFVHAVQRLGGQESKSRKQLSVQSSFAEAAQLLKPASAAMTRAVATKGARSEPISVQDIALQSQALLNVKDSNKELLSSEDRERMVIRKFKFEDPRIEQIQDLEVRGDVYTYDSGLVAGYYCSTASPPPTAIQELRATIRVLQTIPDVV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01807 252 MobiDBLite consensus disorder prediction 36 62 - -
Aip01g01807 252 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 27 116 IPR044848 GO:0003700
Aip01g01807 252 Gene3D - 93 150 - -
Aip01g01807 252 Coils Coil 38 64 - -
Aip01g01807 252 MobiDBLite consensus disorder prediction 1 85 - -
Aip01g01807 252 MobiDBLite consensus disorder prediction 63 79 - -
Aip01g01807 252 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 27 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01807 Aip-Chr1 84685602 84688667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01807 84 121 G2-like Transcription Factor Family AT2G42660 71.053 4.43e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01807 K16803 - aip:110265077 180.259