Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01800 ATGGTAAATAGAGATGGATTCTTTTTTGCTGTGAAAGAGGTTTCACTGCTTGATCAAGATAATCAGGGAAAGCAAAGTATCTATCAACTGGAGCAGGAGATAGCACTTTTGAGTCAGTTTGAACATGAGAACATAGTTCAATACTATGGCACAGAAATGGTCCTTATGGATCTCAAGATTTTTAAGTTATCAGCAAATGTGGAATGTTTGTGA 213 0.3615 MVNRDGFFFAVKEVSLLDQDNQGKQSIYQLEQEIALLSQFEHENIVQYYGTEMVLMDLKIFKLSANVECL 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01800 70 PANTHER OS02G0769800 PROTEIN 3 61 - -
Aip01g01800 70 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 3 61 - -
Aip01g01800 70 Gene3D Phosphorylase Kinase; domain 1 1 63 - -
Aip01g01800 70 SUPERFAMILY Protein kinase-like (PK-like) 4 51 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01800 Aip-Chr1 83580527 83581127 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01800 2 61 MAP Kinase Kinase Kinase AT4G08480 60.000 8.10e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01800 K13414 - gmx:100778553 98.2117