Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01792 ATGCATGGCCAAATCTTAACAACACTTAGTAAATTTTTTATTCCACTTTCAATTCCCTCCAAAAACACACACGAACCCTTTCTCCCACAACAACTAAACCTCACACCTTCAATTCGAAAAGTGAGACCCTCACCTTTGCTAACCTTTCGCGCACAACAACCCTCACCTTCGCCATTCTCACCTTTCAACACTCATCACCTTCCCCTTCTCACCGTCGCCGTTGACTGTAAAGGGAAATTTTTTTTTCACCTTTTCACCAAATCAGAAACGGTGTCATATCCCCCAATCCCTAATCTAATAAACCCCATTCGTCTCTCTTCTCTGTTCTCTCTCGTCACTCTCTTCTCTGTTCTCTCGTCGCTCTCACCTCTCGTCTCCGGTCTCAAGCTCACTTCTCTCTCGGTCTCGCGCGCGCACTCACTATCTCAGACTCAAGCTCATCGTTGCGGTTTGTATCGTCACCATGTCGCACTCAGTCGCCGCCTTCCATGCGCTCACTTCGCCGGTGGTAGAAGAAGACGGAACCAGCATCTTGTCCCTCGGGTGGTGGTGGTCTtcgtcttcttgtttcggccattaattcaattgATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATAGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGAGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAAGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAGGGTCACATTGAATTGGTATGA 798 0.4424 MHGQILTTLSKFFIPLSIPSKNTHEPFLPQQLNLTPSIRKVRPSPLLTFRAQQPSPSPFSPFNTHHLPLLTVAVDCKGKFFFHLFTKSETVSYPPIPNLINPIRLSSLFSLVTLFSVLSSLSPLVSGLKLTSLSVSRAHSLSQTQAHRCGLYRHHVALSRRLPCAHFAGGRRRRNQHLVPRVVVVFVFLFRPLIQLIDEELLQEVVNIGFDRNQLVESLCNRIQNEMELVMICLKSYGGCARPLMDVPCVQDRVFYFPQGHIELV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01792 265 CDD UBA_SnRK1_plant 197 226 - -
Aip01g01792 265 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 196 237 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01792 Aip-Chr1 81348856 81352518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01792 222 265 B3 DNA Binding Superfamily AT1G43950 44.000 2.92e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01792 K07198 - ahf:114925841 134.035