Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01783 ATGCTTCTGATCCTGACAAGCACGCCATCGCTGTTGCCGCTGCCACAGCCGCAGTCGCTGAGGCTGCCGTCGCTGCAGCTCAGGCGGCTGCCGCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCAGACTGACGAGCAGCAGCGGTAGGTCCGCCAACGCTGGAAGCGTGACCGCCGCTAGTAGCCAAGATTGGGCCGCCGTTAAGATTCAATCCGCCTTCCGAGGATGTTTGGCAAGGAGAGCATTACGGGCACTGAAAGGATTAGTTAAGCTTCAAGCACTTGTGAGAGGCCACATCGAAAGAAAGCGAACAGCACAACAGATGAAAAAATGGCAAGCACTTTTAAGAGCACAAGCTAGAGTCTGTGCTCGCAGAGTTCATATCCTTCAAGCCCCAAATTCCACTTCTAAGTCATCTTCCTGCCACCTTCATGGGCCAGCAACACCAGAAAAGTTTGAAAGCCCAATCAGATCTAAGAGCATGAAAGATGAGCACTCACCATTGCTTAAGAGAAATGGCTCCAAATCATGCCTCCAGCAGGTCCATGGTAGTAGCGGGCAAGAGAAATGTAGGAACAGATCAGAAAGGCACATAGATGAACTAACATGGAACCAAGAAAAATCATCAATGAGAACCTCTAGCACCACCAATGGTGACAAAAGTGACAAGAACCCTGAAATTGATTCCAGAAGATCACAAGCCACGTCATCATCAAGACGTAGGAACCTCTTTTCCACCACCAACAACCATGTCTTAGTTTCTGATCAGCATTGCATTAGTAGCAAGAGTTACACCACAAGCAACAACAAGAAGGAATCATCATCAGTGATATCTCTTCAATCAGGCCCAAGCCCATCTTGTGAGGTCCAGTCTCAGAGCCCAATGAAGCCCAATTGGGTTGAGGAGAGCCCATTATGTACAGCCGAAAGCAGCCCCCAATACCTATCAGCATCTTCCAAAGATAATGTACCCAAAAGAAGCCCTTTTGGTGGGTCAAGGAGTTATATTTGTCACTATTCTGATTACCCAAGTTACATGGCATGCACTGAATCTTCAAAGGCAAAAGTGAGGTCTCTTAGTGCCCCAAAACAAAGGCCCAACCAATGTGATAGGTCTAGTTCATCTAATAGGTACTCACTCAATGGATTGGGTTCTCAGAGGCCTAATTATGCTTTGCAAGGATGCTTCGCCAACAAGGGTTATCCAGGTTCTGGTCGTTTGGACAAGCTTGGAATGCCTGTGGGATATAGATTCTAA 1407 0.4193 MLLILTSTPSLLPLPQPQSLRLPSLQLRRLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRLTSSSGRSANAGSVTAASSQDWAAVKIQSAFRGCLARRALRALKGLVKLQALVRGHIERKRTAQQMKKWQALLRAQARVCARRVHILQAPNSTSKSSSCHLHGPATPEKFESPIRSKSMKDEHSPLLKRNGSKSCLQQVHGSSGQEKCRNRSERHIDELTWNQEKSSMRTSSTTNGDKSDKNPEIDSRRSQATSSSRRRNLFSTTNNHVLVSDQHCISSKSYTTSNNKKESSSVISLQSGPSPSCEVQSQSPMKPNWVEESPLCTAESSPQYLSASSKDNVPKRSPFGGSRSYICHYSDYPSYMACTESSKAKVRSLSAPKQRPNQCDRSSSSNRYSLNGLGSQRPNYALQGCFANKGYPGSGRLDKLGMPVGYRF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01783 468 Pfam Protein of unknown function (DUF4005) 362 431 IPR025064 -
Aip01g01783 468 Gene3D - 109 165 - -
Aip01g01783 468 MobiDBLite consensus disorder prediction 255 270 - -
Aip01g01783 468 MobiDBLite consensus disorder prediction 238 254 - -
Aip01g01783 468 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Aip01g01783 468 MobiDBLite consensus disorder prediction 271 285 - -
Aip01g01783 468 MobiDBLite consensus disorder prediction 312 344 - -
Aip01g01783 468 MobiDBLite consensus disorder prediction 205 220 - -
Aip01g01783 468 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Aip01g01783 468 Pfam IQ calmodulin-binding motif 139 153 IPR000048 GO:0005515
Aip01g01783 468 Pfam IQ calmodulin-binding motif 114 133 IPR000048 GO:0005515
Aip01g01783 468 MobiDBLite consensus disorder prediction 222 237 - -
Aip01g01783 468 MobiDBLite consensus disorder prediction 183 297 - -
Aip01g01783 468 PANTHER IQ-DOMAIN 5-RELATED 91 463 - -
Aip01g01783 468 MobiDBLite consensus disorder prediction 410 435 - -
Aip01g01783 468 PANTHER CALMODULIN BINDING PROTEIN IQD22 91 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01783 Aip-Chr1 79938582 79947361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01783 92 468 IQD Protein Family AT4G23060 38.554 8.95e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01783 - - ahf:112805329 720.694