Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01763 ATGGAGATGGAGCGCGTCTTTGGATTCCCCCAACCTCACATGGATCGACGCCCGAGAAAGAGAGCTAGATTAGGCTGGGATATCCCTGAGGCCCCAAAGGCTCAGGTAGGATTATTTTGTGGACAAGAGGTTGGAACTATTTCAAGCTATGCTCCTTCATGGGGTCCCTCAGAACATACCAGTAGTTCTCTTTCTGTTAAGGGTGTTGCTCGAAATGGTTCTCCCCCTCAGCGAGATGATGACAAAGATGGCCATTACATTTTTGAGCTTGGAGAAAATTTAACTTCTCGCTACAAGATTCATAGCAAAATGGGTGAAGGAACTTTTGGACAGGTCTTAGAATGCTGGGACAGAGAAAGGAAGGAAATGGTTGCCATTAAAATTGTTCGGGGGGTAAAGAAGTATCGGGAAGCAGCCATGATTGAAATTGAGGTGCTGCAGCAGCTTGGTAAACACGATAAAGGTGGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTCTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGACAACTGTTGGAATGTGTAGCATTCATGCATGATTTGCGAATGATCCATACTGACCTGAAGCCTGAAAACATACTTCTAGTTTCTCCCGAGTATGTCAAAGTTCCTGATTACAAGAGTTCATCAAGATCACCAAGTTCTTATTTCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGATTTTGGCAGCACGACTTATGAGCGAGAAGATCAGAATTACATTGTATCAACTCGACACTATAGGGCACCTGAAGTTATCCTTGGACTGGGCTGGAGTTACCCGTGTGATATTTGGAGTGTGGGGTGTATATTGGTTGAGTTATGCACTGGTGAAGCTTTGTTTCAGACCCATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTGCTTGGACCACTACCTCAGCACATGCTGAAGAGAGTAGAGTAA 1047 0.4384 MEMERVFGFPQPHMDRRPRKRARLGWDIPEAPKAQVGLFCGQEVGTISSYAPSWGPSEHTSSSLSVKGVARNGSPPQRDDDKDGHYIFELGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGVKKYREAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVE 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01763 348 Pfam Protein kinase domain 98 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01763 348 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
Aip01g01763 348 ProSiteProfiles Protein kinase domain profile. 98 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01763 348 SMART serkin_6 98 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01763 348 Gene3D Transferase(Phosphotransferase) domain 1 152 346 - -
Aip01g01763 348 MobiDBLite consensus disorder prediction 53 84 - -
Aip01g01763 348 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 348 - -
Aip01g01763 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Aip01g01763 348 SUPERFAMILY Protein kinase-like (PK-like) 85 346 IPR011009 -
Aip01g01763 348 CDD PKc_CLK 85 346 - -
Aip01g01763 348 PANTHER KINASE AFC1 1 348 - -
Aip01g01763 348 MobiDBLite consensus disorder prediction 53 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01763 Aip-Chr1 76618660 76622222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01763 263 343 EF-hand Containing Proteins AT5G22840 41.379 1.04e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Aip01g01763 Pkinase 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01763 K08287 - gmx:100804452 677.552