Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01758 ATGACATTTTTTGTTGCTGCCGTAATTGACTTTCTATTTGGTGGCGGTTCTAGTGATTATGGCGTCACTGTCCCTAGCCAGTGTGACGATCTCGGATCTTCTTTCGGATCTCGGATCTTCTCCGGCGACGACCTCCTTCGGCGACATCTCCTCCCGTGCGCCTCCCTCAGCATTTTCTCTGGTGACATCTCTCTATTGAAGATCTCTAAAATCCAAGCCATCACAAGCAGAACAAGCACAACTCTCCCATACTTCCTCAGTTCTTCTATAACTTCAAAGCATGAACCAGATGGCAGAGTAATCTTGGTTGAATTCGAAATCCTTCGGTTGTTGAATATATATGTTCCAAATAATGGGTGGAAAGAGGAACCAAACTCATTTCAAAGGAAAAGAAATTGGGACAAAAGGATTCTAGAATTTGTTACACAAAATTCAGACAAGCCTTTGATATGGACTCTGCTTGATGGCACCAAGTTTGATTCCAGCAGAGATAGGGGAGCCCCTTTCACGTTCACACTTGGACAAGGGCAAGTAATTAAAGGATGGGATGAAGGTATTAGAAGCATGAAGAAAGGTGAAAATTCCCTTTTCACCATCCCACCTGAGCTAGCTTATGGTGAATCCGGTTCTCCTCCCACAATTCTGCCCAAAGCAACTCTTCAATTTGATGTTGAGCTATTGTCTTGGACTAGTGTGAAGGACATATTTCGTCGACATCTGTACTTTACTATGTGTTGCCCTCTTGGTGCCACAGTTAATTATGAGGCACGCCTTGAAGATGGAACACTTGTAAAGAAATCTGATGGGGTAGAGTTCACAGTAGAAGACGGTCACTTTTGCCCTGCATTGTCAAAGGCCATCAAAACAATGAAGAAGGGACAAAAAGTTGAATTAGTATCTTTTGTGAAGGATAAGGAATCTTGGGACATGGAAACTCCAGAGAAAATTGAAGCTACTGGTAAGAAGAAAGAAGAAGGGAATGCACTGTTTAGAGCTGGTAAATATGCAAAAGCTTCTAAAAGATATGAGAAGGCTATTAAGTTCATAGAATATGATACCAACTTCAGCATTGAAGAGAAGAAGAGTACCAAGGACTTGAAGATTGCTTAA 1110 0.4189 MTFFVAAVIDFLFGGGSSDYGVTVPSQCDDLGSSFGSRIFSGDDLLRRHLLPCASLSIFSGDISLLKISKIQAITSRTSTTLPYFLSSSITSKHEPDGRVILVEFEILRLLNIYVPNNGWKEEPNSFQRKRNWDKRILEFVTQNSDKPLIWTLLDGTKFDSSRDRGAPFTFTLGQGQVIKGWDEGIRSMKKGENSLFTIPPELAYGESGSPPTILPKATLQFDVELLSWTSVKDIFRRHLYFTMCCPLGATVNYEARLEDGTLVKKSDGVEFTVEDGHFCPALSKAIKTMKKGQKVELVSFVKDKESWDMETPEKIEATGKKKEEGNALFRAGKYAKASKRYEKAIKFIEYDTNFSIEEKKSTKDLKIA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01758 369 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 300 369 - -
Aip01g01758 369 SUPERFAMILY DNase I-like 92 151 IPR036691 -
Aip01g01758 369 Gene3D Tetratricopeptide repeat domain 305 369 IPR011990 GO:0005515
Aip01g01758 369 Gene3D - 151 236 IPR046357 GO:0003755
Aip01g01758 369 SUPERFAMILY FKBP-like 250 299 - -
Aip01g01758 369 SUPERFAMILY FKBP-like 150 238 - -
Aip01g01758 369 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 152 298 - -
Aip01g01758 369 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 152 230 IPR001179 GO:0003755
Aip01g01758 369 Gene3D - 249 302 IPR046357 GO:0003755
Aip01g01758 369 PANTHER PEPTIDYLPROLYL ISOMERASE 300 369 - -
Aip01g01758 369 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 250 298 IPR001179 GO:0003755
Aip01g01758 369 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 153 227 IPR001179 GO:0003755
Aip01g01758 369 Gene3D Endonuclease/exonuclease/phosphatase 54 150 IPR036691 -
Aip01g01758 369 PANTHER PEPTIDYLPROLYL ISOMERASE 152 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01758 Aip-Chr1 76219655 76222952 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01758 171 369 Calmodulin-binding Proteins AT3G25230 36.364 1.39e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01758 K09571 - zju:107421930 226.483