Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01746 ATGGCTTCAATTGGGGTGTCAGAGATGCTTGGAAACCCCATTAAGTTGAGTGGTGCAGCAAGGTCAGCACCATCAGCTTCTACCCCTGCCACCTTCAAGACTGTGGCACTCTTTGGTAAGAAGAAGGCAGTACCACCTCCTCCTTCAAAGAAAGCTGCTGCTGCTATCACTCCTGCCAATGATGAACTCGCCAAGTGGTTTGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCCAAGATCCGACCATACTTGACTGGAGAAGTGCCCGGAGACTATGGTTATGATCCTTTTGGTCTCAGCAAGAAGCCAGAGGACTTTGCCAATATGCTTGGCAAGTAA 354 0.5 MASIGVSEMLGNPIKLSGAARSAPSASTPATFKTVALFGKKKAVPPPPSKKAAAAITPANDELAKWFGPDRRIFLPEGLLDRSKIRPYLTGEVPGDYGYDPFGLSKKPEDFANMLGK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01746 117 Pfam Chlorophyll A-B binding protein 87 114 IPR022796 -
Aip01g01746 117 Gene3D Chlorophyll a/b binding protein domain 73 115 - -
Aip01g01746 117 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 113 - -
Aip01g01746 117 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 113 IPR001344 GO:0009765|GO:0016020
Aip01g01746 117 SUPERFAMILY Chlorophyll a-b binding protein 68 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01746 Aip-Chr1 74382553 74385148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01746 1 112 Chloroplast and Mitochondria Gene Families AT4G10340 60.177 6.82e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01746 K08916 - gmx:100789786 157.147