Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01729 ATGTCGAAGCTCGGAGGCGGCAACTGTTTTCGGCGTCTCTTGCTCAGTGTCAATGTCGGTCTTGCCCTTGTTGAAGAAATCGTTGCTTTCGTTGCGTTGTTTCAGGGGTCCAATATTCTTGTAGATAATAAAGGTTGCATTAAACTTGCAGATTTTGGGGCCTCCAAACAAGTTATTGAGCTGGCTATTATTTTGGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAGATTCTGAAATCCTCTTTAGGGTTCATTGAGCTGGACCTCGAGAAAAGATATACTTTAAGGGCAGCAATTGTCACTTGTGGAGGGCTCTGCCCTGGCCTTAATGATGTCATCAGACAGCATGGTGCTTTTGAATATGATGGCGGTGTGCTTCCATCAGGTCGAGCAGGTTCAATAGTTGTGGACCTCACTACACCACACAAATACAAGATACTGAGACCTGGAAGAAACTTGCAAAAGAAACTCTGCATTCAACAGGATTCAGTTGCTACATCATGCTCTAGGTGTAGAGAATTGTGGTGTTCTTCTCTTCAATGA 555 0.445 MSKLGGGNCFRRLLLSVNVGLALVEEIVAFVALFQGSNILVDNKGCIKLADFGASKQVIELAIILGAKSMKGTPYWMAPEILKSSLGFIELDLEKRYTLRAAIVTCGGLCPGLNDVIRQHGAFEYDGGVLPSGRAGSIVVDLTTPHKYKILRPGRNLQKKLCIQQDSVATSCSRCRELWCSSLQ 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01729 184 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 35 82 - -
Aip01g01729 184 Pfam Protein kinase domain 37 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01729 184 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip01g01729 184 Gene3D - 99 130 - -
Aip01g01729 184 PANTHER ACTIVATED PROTEIN KINASE KINASE KINASE 3, MAPKKK3, MEKK3, PUTATIVE-RELATED 35 82 - -
Aip01g01729 184 SUPERFAMILY Protein kinase-like (PK-like) 37 85 IPR011009 -
Aip01g01729 184 SUPERFAMILY Phosphofructokinase 97 119 IPR035966 GO:0003872|GO:0006096
Aip01g01729 184 Gene3D Transferase(Phosphotransferase) domain 1 34 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01729 Aip-Chr1 71264557 71266941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01729 11 82 MAP Kinase Kinase Kinase AT1G09000 63.889 1.50e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip01g01729 Pkinase 1.8e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01729 K20606 - thj:104805874 91.6633