Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01723 ATGGCTTCACTTCACACCACCATTACAGCCTTATTCCCTTCAATCCAAACCCCAAGATCCCTCCTCACCCACCCAAAACCCATCCTCAACCTCTCCCTCTCCACTACCACCTTCCCCTCCCTCTCCCTCAAACTCACCCGTCCCCGCCACTCCGCCGGATCCCTCGGCGCCCGCATGGTCTCCACCGCGGCCGCAAGCTACGCCCTCGCCCTTGCCGACATCGCCAAATCCAACAACACCCTTGACGCCACCACAACCGACATCGAGAAAATCGATGAGATCTTCTCCGATCCACAGGTGTTCGACTTCTTTGCCAACCCAACCGTAGACGCCGAACTGAAGAAGAAGCTCGTCGATGAAATCGCCACGTCATCAAGCTTCCAATCCCACACGCGCAACTTCCTGAACATTCTTGTCGATGCGAAGCGCATTGGGCTGGTGAAGGAGATTGCGAAGGAGTATGAATTCGTGTACAACACGCTCACAGATACGGAAATGGCGGTGGTGAGCTCGGTGGTGAAGCTCGAGTCGCAGCACTTAGCACAGATCGCGAAGCAGGTGCAGAAGCTAACGGGGGCTAAGAACGTTAGAATCAAGACAGTTATTGACCCGAGCCTGGTGGCTGGGTTTACTGTTAGGTATGGTAATTCTGGATCGAAGTTGATTGATATGAGCGTCAAGAAGCAGCTTGAGGAGATTGCTGCTCAGCTTGATTTGGGTGACATCAAACTCAATgaatga 741 0.5317 MASLHTTITALFPSIQTPRSLLTHPKPILNLSLSTTTFPSLSLKLTRPRHSAGSLGARMVSTAAASYALALADIAKSNNTLDATTTDIEKIDEIFSDPQVFDFFANPTVDAELKKKLVDEIATSSSFQSHTRNFLNILVDAKRIGLVKEIAKEYEFVYNTLTDTEMAVVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRYGNSGSKLIDMSVKKQLEEIAAQLDLGDIKLNE 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01723 246 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 196 215 IPR020781 GO:0015986|GO:0016020|GO:0046933
Aip01g01723 246 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 59 162 IPR026015 -
Aip01g01723 246 Hamap ATP synthase subunit delta [atpD]. 59 239 IPR000711 GO:0015986|GO:0046933
Aip01g01723 246 Pfam ATP synthase delta (OSCP) subunit 64 237 IPR000711 GO:0015986|GO:0046933
Aip01g01723 246 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 64 237 IPR000711 GO:0015986|GO:0046933
Aip01g01723 246 Gene3D - 63 155 IPR026015 -
Aip01g01723 246 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Aip01g01723 246 PRINTS ATP synthase delta subunit signature 132 143 IPR000711 GO:0015986|GO:0046933
Aip01g01723 246 PRINTS ATP synthase delta subunit signature 143 157 IPR000711 GO:0015986|GO:0046933
Aip01g01723 246 PRINTS ATP synthase delta subunit signature 194 209 IPR000711 GO:0015986|GO:0046933
Aip01g01723 246 PRINTS ATP synthase delta subunit signature 212 230 IPR000711 GO:0015986|GO:0046933
Aip01g01723 246 PANTHER BNACNNG66500D PROTEIN 53 244 - -
Aip01g01723 246 PANTHER ATP SYNTHASE DELTA CHAIN 53 244 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01723 Aip-Chr1 70747096 70748826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01723 1 244 Primary Pumps ATPases AT4G09650 60.643 4.16e-100 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01723 K02113 - tcc:18594548 306.99