Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01718 ATGGCCACCACTAGCCTCGACGGCGCCGGAGAGGATCGTGTTCTGGCGACGGCGCAGCAGATCCTCATGAGTCTCAACACTCCCAAGGAGGTTCGCCAGGACATGCTCCTCATTTTCTCCTCCTTCGATAACCGTCTCTCTACCATTTCTGACCTCATCGACGCCGATAACGACTCCAAGTCCACCATCTCCGACGCCGTTCCCGCCGATGAGGAGGAACAAGAAGACCTTGACCGCCTCGAGGCCGCCATGAAAGTCATCCTCCGTTGGGACGCCTCCTTCTCCGGCGGCGGCGATTCCTTGCGCCACTCCACCTCCATCCTTGACTCGCATGTCCACAGAGTAGAGTACTTCTCTGCCGTTGATGACATCATCCAGTGGATCGATGAAAATCTCTCGTTAGCGCTGCCGTTGCCACCTCGCCGAGCCGCCATGTGTGACCGCGCCGAAAAGGCTATCCAGATCGCGATGACAAGGCTCGAGCACGAGCTCCGCCATGTGCTGATCCGCAGCACCGTCCCCCTAGACGCCGACAGCCTCTACAGCTCGGTGCATAGAGTTTCACTCTCGTTGGCCTCACACGACGGCGCCGCCGCCGCCGAAATCGACGGAAGCTCGGAGAGCTTTGGCAAAACCCCAAATCACCGGTTCCACGAGCGCGTCGCGAGCTTTGAAGACGAAAACGAAAACGATGGCGTTTCAATCGATTTGGTGCATCCCGATGCGGTTCCAGAGCTGAGAGAAATCGTAACTCGAATGATAAGGTCTGGTTACGAAAGAGAGTGCCTTCAGGTTTATAGCGGTGTTAGGCGTGACGCTTTGGATGAGTGCTTGGCTATTATTGGTGTCGAGAGGTTGAGTATCGAAGAGGTTCACAGGGTTGAATGGAAGGTTCTAGATGAGAAGATGAAGAATTGGGTTCATGCTGTTAAGATTAGTGTTGTGGTTTTGCTGAGTGGTGAGAAGAGGCTCTGTGAAAATGTGTTTGGGGATTTGGTTGAGGTCAAAGAGGTATGTTTTAATGAGATTGCTAAAGGGTGTGTTATGCAGTTGCTGAATTTCGCCGAGGCTGTCTCAATTTGTAAGAGGTCCCCGGAGAAATTGTTCAGGATATTGGATATGTACGAGGCATCGAGGGATGTTCTGCCTGATTTGGAGGCGATGGTTTCTGATGAGTTTGTGGCTGGTGAGGCCAGGGGAGCGCTTAGTGGACTCGGCAATGCCGTGATAGGGACGTTTGCCGAGTTTGAGAATTGTATTAGGAATGAGACTTCCAAGAAGCTGGTGATTACAGGGGATGTTCATCCGTTGGCTCGATATGTGATGAACTACCTAAAGTTGCTTGTGGATTACAGTGAGCCCTTGAACTTGCTCTTGGAAATCAGAGAAGAGGATCTTTATCGGGTTCAAAATGATTTCAGGGGTGATGTTTCCCAGATAGAGGCCATTTCTCCCTTAGGACAAAGAACGTTGTTGTTGATGTCTGAGCTTGAGTTTAACCTTGAGGAAAAATCAAGGCTCTATGAGGACAATGCGCTGCAGCAGATATTCTTGATGAACAATCTCTATTACCTAGTGTGGAAAGTAAGAGACTCCGAAATCAGGAAGGTCTTAGGGGATGATTGGATCCGGAAGCGCCGTGGCCAGATACGCCAGTATGCTACAGGCTATCTCAGGGCCTCTTGGACCAGAGCCTTGGCTTGTTTGAAGGATGAAGGAATTGGAGGGAGCTCTAGTCTTAGTAGTGCCTCAAAGATGGCCTTGAAGGAGAGGTTCAAGAGTTTCAATGCCTGTTTTGAAGAGATTTATAGGATTCAGACAGCTTGGAAGGTACCGGATGATCGGCTTCGTGAAGAGCTGCAGTTATCTATTTCGGAGAAGGTGATTCCAGCGTACCGCTCGTTTGTGGGAAGGTTTAGCAGTCATCTAGTAGAAGGAAGGCATGCTGGAAAATACATTAAGTATACCCCAGAGGATCTTGATACCTATTTATTGAATTTATTTGAAGGGTCCCCTGCTGTATTGCATCACATAAGGAGAAAAAGTACATAG 2052 0.5 MATTSLDGAGEDRVLATAQQILMSLNTPKEVRQDMLLIFSSFDNRLSTISDLIDADNDSKSTISDAVPADEEEQEDLDRLEAAMKVILRWDASFSGGGDSLRHSTSILDSHVHRVEYFSAVDDIIQWIDENLSLALPLPPRRAAMCDRAEKAIQIAMTRLEHELRHVLIRSTVPLDADSLYSSVHRVSLSLASHDGAAAAEIDGSSESFGKTPNHRFHERVASFEDENENDGVSIDLVHPDAVPELREIVTRMIRSGYERECLQVYSGVRRDALDECLAIIGVERLSIEEVHRVEWKVLDEKMKNWVHAVKISVVVLLSGEKRLCENVFGDLVEVKEVCFNEIAKGCVMQLLNFAEAVSICKRSPEKLFRILDMYEASRDVLPDLEAMVSDEFVAGEARGALSGLGNAVIGTFAEFENCIRNETSKKLVITGDVHPLARYVMNYLKLLVDYSEPLNLLLEIREEDLYRVQNDFRGDVSQIEAISPLGQRTLLLMSELEFNLEEKSRLYEDNALQQIFLMNNLYYLVWKVRDSEIRKVLGDDWIRKRRGQIRQYATGYLRASWTRALACLKDEGIGGSSSLSSASKMALKERFKSFNACFEEIYRIQTAWKVPDDRLREELQLSISEKVIPAYRSFVGRFSSHLVEGRHAGKYIKYTPEDLDTYLLNLFEGSPAVLHHIRRKST 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01718 683 Pfam Exo70 exocyst complex subunit 304 665 IPR046364 GO:0000145|GO:0005546|GO:0006887
Aip01g01718 683 PANTHER EXOCYST COMPLEX PROTEIN EXO70 66 682 IPR004140 GO:0000145|GO:0006887
Aip01g01718 683 SUPERFAMILY Cullin repeat-like 111 669 IPR016159 -
Aip01g01718 683 Gene3D Exocyst complex component Exo70 109 675 - -
Aip01g01718 683 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 66 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01718 Aip-Chr1 70644571 70647052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01718 12 682 EXO70 exocyst subunit family AT5G50380 56.466 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01718 K07195 - adu:107489765 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01718 01 70644571 70647052 Aip01g01718 01 70644571 70647052 ECH
Aip08g03308 08 124195721 124201058 Aip01g01718 01 70644571 70647052 PCT