Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01692 ATGACATTAAGTTGTGCAAACGCAAGCTTTGTGACACCTCTTGTGTATGCTGCCATGGGAAGCTCAAGACATATTGCTATAGGACCTGCAGCTATGGTCTCACTCTTGCTTGGAGCTATGCTTTCTCATGACATTAGAGACCACAAGAGCCATGAATATCTACGTCTTGCCTTCACTGCTACATTCTTTATCAGAGTTACTCAGCTCGCACTCGACGTTCTTAGTACAGTGGAATTTGGAGACAATTATCATTGGAACATCATGCTTGATCTTCCTTCTTATAACCAACCTTTTGAACCAGCACTGGTATGTGCATTAGAGCATATAGGATCTACAATTTTGGAGGACCTGTCCAGTTCAACCTACATTATTGGAGTGGAGACATGTTGTATTGGGAATTCTTGTCTCAAAATGACAAGTTTAAAAGCACAGGTTGATAGTGGAACATCATTTACATTTCTTCCTGGGCATGTGTATGAATCCATAGCAGAGGAGTTTGATAAAAAGCTAAATGCTTCAAGAGCTACCTTCAAAGATACTCCCTGGGAGTATTGTTATGCTTTCCAGTTCACAAGACTTTCCAAAGATTCCCACCTTAACACTCATGTTCCAATAGAATAA 621 0.4042 MTLSCANASFVTPLVYAAMGSSRHIAIGPAAMVSLLLGAMLSHDIRDHKSHEYLRLAFTATFFIRVTQLALDVLSTVEFGDNYHWNIMLDLPSYNQPFEPALVCALEHIGSTILEDLSSSTYIIGVETCCIGNSCLKMTSLKAQVDSGTSFTFLPGHVYESIAEEFDKKLNASRATFKDTPWEYCYAFQFTRLSKDSHLNTHVPIE 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01692 206 Pfam Xylanase inhibitor C-terminal 140 197 IPR032799 -
Aip01g01692 206 Pfam Sulfate permease family 8 71 IPR011547 GO:0016021
Aip01g01692 206 Gene3D Acid Proteases 105 205 IPR021109 -
Aip01g01692 206 PANTHER ASPARTYL PROTEASES 120 188 IPR001461 GO:0004190|GO:0006508
Aip01g01692 206 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 120 188 - -
Aip01g01692 206 SUPERFAMILY Acid proteases 118 191 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01692 Aip-Chr1 67920789 67922341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01692 8 71 Inorganic Solute Cotransporters AT1G22150 64.615 1.54e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01692 - - aip:107618485 194.512