Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01690 ATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGACGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTACATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGTACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCAAAATAATTATGGCATTGGAAACTTCAAGAAAAAACCTACACCCGAGACAAGGTGTGGTTGCAGTGTAATGATGGATATTCGTCTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTCTGATGAACACAATCATCTGCTTTTGGATCCTCGATTGACTGGATTGCTTCATGGGCATAGATTCATGTCTGAGgctgatattagtgttaggcagtga 477 0.3816 MFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVDITFEFYNRYARTRGFSARKNRTRKSRAGVLKLKNFVCHREGFRPQNNYGIGNFKKKPTPETRCGCSVMMDIRLDAPSGRWFISYFSDEHNHLLLDPRLTGLLHGHRFMSEADISVRQ 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01690 158 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 8 145 - -
Aip01g01690 158 Pfam FAR1 DNA-binding domain 45 135 IPR004330 -
Aip01g01690 158 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01690 Aip-Chr1 67771914 67772390 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01690 FAR1 1.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01690 - - ahf:112723376 313.538