Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01676 ATGTTGGTGGGTTTCGATTTGACCAGAGAGAGGGCGTTGAGGGCAGTGGTGAGGCTACAGACTATATTTCGCGGAAGGCTAGTGAGGAAGCAAGCTGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCTCGCGTCCGCGCTGGGAATGTGAGGAACTCTCCAGAAGGGAAAGCTGTGCAGACACTATTAGATCAATACCGCAACCAAGTTGATCCTATTAAGGAGGCTGAGGAGTATGAGGGTGGTTGTTGTTCTGTCTTTGCTGAGGTTGATGGTGCACCTGTGTCACTTAATTAG 309 0.4984 MLVGFDLTRERALRAVVRLQTIFRGRLVRKQAAVTLRCMQALVRVQARVRAGNVRNSPEGKAVQTLLDQYRNQVDPIKEAEEYEGGCCSVFAEVDGAPVSLN 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01676 102 PANTHER IQ-DOMAIN 5-RELATED 11 73 - -
Aip01g01676 102 ProSiteProfiles IQ motif profile. 14 41 IPR000048 GO:0005515
Aip01g01676 102 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 11 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01676 Aip-Chr1 65930103 65931173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01676 11 82 IQD Protein Family AT1G72670 62.500 7.86e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01676 - - adu:107464314 132.494