Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01665 ATGACCTTGACTTACACAATTGGCACACCCTCTCTCTTCGAAACTTCATCTTTCTCCATCTTCATGCACTCCAAAGAAAATCGAAGAACCCTAGCACTCCGTGACGAACCACAGCACTCTGCGAAGAACATCGCCGATGCCGCAATGCCTCCGTCGATGCTCCCTTCACCGCCGCTCCCTTATTCGCTGCAAACCCCTAACCCCTTTCCATTTTTCACTGGGCTATCGAGCCAGTCCTGCTCAGTCAGTGGTTTGGGAAGCCATGGTGCCTTCCAAAAAGGGACTTGTGGTTTCTACAATGCAAACAAATTTGCCAAGCTTGTGAGAAGAAGAGAGTTCATGGCCAGCGCCGCTGAGGGAACCACCGGGGCTCTTACCTGCGGCACTTGTAGCTGCCATAGAAACTTCCATAGAAGAAAGGAACTAGCTGCACCATCCAGAGTTCCATTTTGCTTTGTTAACCAGTGCGGGCCTAGGGGAAGCGAGGCATTACCTGCTGGTATAGTGTCCAGTACTTCCAACTTTGAAACACGACCTCTATGGGATATTCCTGCCGTAAGGAAGAAGCATCATCAGCGGAGACAAGTTGCATATGTGGAAAAGGTTCACAAGGCCTAG 618 0.5032 MTLTYTIGTPSLFETSSFSIFMHSKENRRTLALRDEPQHSAKNIADAAMPPSMLPSPPLPYSLQTPNPFPFFTGLSSQSCSVSGLGSHGAFQKGTCGFYNANKFAKLVRRREFMASAAEGTTGALTCGTCSCHRNFHRRKELAAPSRVPFCFVNQCGPRGSEALPAGIVSSTSNFETRPLWDIPAVRKKHHQRRQVAYVEKVHKA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01665 205 Pfam ZF-HD protein dimerisation region 111 141 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01665 Aip-Chr1 65060204 65064520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01665 111 140 ZF-HD Transcription Factor Family AT1G74660 63.333 1.13e-08 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aip01g01665 ZF-HD_dimer 3.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01665 - - adu:107468004 75.8701