Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01664 ATGGTCAAAGCGCCGGTGCTACCCCCTTCTTCCTCGCTGCCACCACCAATCAAGCGAAGGTTAGCCCAGCCACCACTAGAAGCCCCTGTGAAGCTTAGTCAGCCATCACCTCTGCTTGACCGCCCCTTCCTCTGTTCTCAAACTCAGTTGGTTCAGAATTTCCATATTTTGAGCCCTCTCCTCAAGCATAAACAATATTGCACTGTTTGCTGCGTCATCTTCTTCAGGGATGGCCACTGGAGTGAACAAGATGCTGCAATTTTCATACCAGGAGACATAATCAACATTAAATTAGGAGATATCATTCTGGCCGATGCTTGTCTTCTTGAGGGCAATCCTCTAAGTGTTGATCAGTCTGCTTTAACAGGAGAATCTCTTCTAGTGACCAAGAACCCCACTGATGAAGTGTTTTCTAGATCAACAGTCAAGAAGGGTGAGATAGAAGCAGTTGTGATTGCCACTGGTGTGCACACCTTCTTTGGTAAAGTGGCTCACTTGGTTGACAGCGCTAACCAAGTTGGACACTTCTAG 531 0.4708 MVKAPVLPPSSSLPPPIKRRLAQPPLEAPVKLSQPSPLLDRPFLCSQTQLVQNFHILSPLLKHKQYCTVCCVIFFRDGHWSEQDAAIFIPGDIINIKLGDIILADACLLEGNPLSVDQSALTGESLLVTKNPTDEVFSRSTVKKGEIEAVVIATGVHTFFGKVAHLVDSANQVGHF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01664 176 Gene3D - 155 169 - -
Aip01g01664 176 Gene3D - 75 154 - -
Aip01g01664 176 SUPERFAMILY Calcium ATPase, transduction domain A 72 167 IPR008250 -
Aip01g01664 176 Pfam E1-E2 ATPase 73 172 - -
Aip01g01664 176 PANTHER PLASMA MEMBRANE ATPASE 75 176 - -
Aip01g01664 176 PANTHER CALCIUM-TRANSPORTING ATPASE 75 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01664 Aip-Chr1 64433090 64434886 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01664 75 176 Primary Pumps ATPases AT2G18960 80.392 6.32e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01664 K01535 - gmx:100794372 171.785