Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01651 ATGAAGAAGCTCACTGCAATTGTTTCCATTTTCGTGATCTTAACTTTCTCTTTTCATGAAATCGCGTATGTTTCTTCATCTCCTCTCTTACACCACGCAAAACAGGTTCACGAAGAGAAATCTTCTACTGTAAGAAATCTTGAACAGGATCAAGAGCATGCTGGTGAAGTGCATTGCTCTAGAGAAAGAAGTAGGGCAGCTCGGAAAGTGATAGAACAGTACTTGACACCGTTTGTTGAGCGAGAAAACTATCATTTTTCAAGAAACTGTAGACTTCACCCTGAAAATGATATATTCAGGGATCAGGAGGAGCATAAAATTTTCGTAGACAGGCATGATTGGCGGTGTGGATATTGTAGAAAAGTTTTCCGTGAAGAAAAATTTCTTGATCAGCATTTTGATAACAGGCACTCCAATCTTCTGAATGTAAGTCATGATAATTGCTTGGCTGATTTATGTGGAGCATTGCATTGTGATGCTGTTATGAATTCCAAGTTCTCTAGAACTAAGTGTTATCCAGCAGCTGCCGCAAAAAACCGTCACCTATGTGAGAGTCTTGCTGACAGTTGCTTTTCCATAAGCCAGGGGCCATCAGCAAGCCGTCTTCATGAATTGTTTATACACCAGTTTTGTGATGCTCACACCTGCTCAGGGAAACAGAAGCCCTTCTCTAGAGGAGGCAAGGAGCAAAGTAGTTTCTTCCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATCTTGTTCAAAGTGATATGAAGGGTCGAACTCAGGAGCTTCGTCGCATCTCAAAAGCAGGATGGAAAGTCAAACCATCATGA 843 0.4176 MKKLTAIVSIFVILTFSFHEIAYVSSSPLLHHAKQVHEEKSSTVRNLEQDQEHAGEVHCSRERSRAARKVIEQYLTPFVERENYHFSRNCRLHPENDIFRDQEEHKIFVDRHDWRCGYCRKVFREEKFLDQHFDNRHSNLLNVSHDNCLADLCGALHCDAVMNSKFSRTKCYPAAAAKNRHLCESLADSCFSISQGPSASRLHELFIHQFCDAHTCSGKQKPFSRGGKEQSSFFRLAAGALILVLLPVFYLFLYLVQSDMKGRTQELRRISKAGWKVKPS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01651 280 PANTHER ZINC FINGER PROTEIN-RELATED 7 280 - -
Aip01g01651 280 ProSitePatterns Zinc finger C2H2 type domain signature. 116 137 IPR013087 -
Aip01g01651 280 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 139 IPR013087 -
Aip01g01651 280 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01651 Aip-Chr1 62601100 62605763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01651 38 280 C2H2 Transcription Factor Family AT5G63280 61.317 2.75e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01651 - - ccaj:109814494 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01651 01 62601100 62605763 Aip03g00197 03 2006429 2009399 ECH
Aip01g01651 01 62601100 62605763 Aip01g01651 01 62601100 62605763 ECH