Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01634 ATGAAGAACAACTTTGAATACTTGGACTTCTGGAATTTCTTGTCAGAGGATGATAACATAGTTAGTGTGGTTTCCTTGCCTATGTTGTTGTTGCTTTTGTGTTTGAATTTATGTGCAAGAGAAAAACAACACAACACTGACATGGAACAGCTCTTGGTTCACCCTGGAGAAGAAGAAGATGATGATGATGATGAAGATGGAGAGAACTTCACAACTGCAGGGATTTGGAGCCAACTCACATTTCGATGGCTGAATCCCATTTTTAGAAAGGGTCGAGTTCAGAAGCTTGAGCTTGCTCACATTCCTGATGTTCCTCATTCTGAAACTGCAGAAAATGCTTCTTCCTTATTGGAAGAATCGCTTGGCAAACAGAAACTTGAAGGGGCTTCCTTGGCTAAAGCTATAACCAGTTCTGTGTGGAAGTCCTTGGCTTTAAATGCAGTTTTTGCCGGGGTTAATACAATTGCATCCTATATGGGTCCATTGTTGATTACATACTTTGTGAATTTTTTGGTGGATGATAATTCCAATTCAAGCATGGATGATAATTCCAATTCAAGCATCCAATGCGGCCTCATTCTTGCATTCATATTCTTCCTCTCAAAGACATTGGAGTCACTGAGCCAAAGACAATGGTACTTTGGTGCTCAGAGAATTGGAATTCGAGTGCGCGCGGCTCTTATGACTCTAATTTACAGCAAGTCCTTAATGATCAAGTGTGCAGGGCCAACCCATGGAAAAATCATAAACTTGGTGAATGTGGATGTTGAAAGAATTGGGGATTTCTGCTGGTATATTCATGGAGTTTGGTTGCTTCCAGTTCAGGTTATTTTGGGCTTAGTGATATTGTACATAAACTTGGGATTCTTGCCTTCAATTTCTGCACTTGCTGTCACCATTTTGGTTATGGTGTGTAACACACCTTTGGCCAATATGCAAGAAAAATTACACTCCAAGATCATGGAAGCTAAGGATACAAGAATCAAGATGACTTCAGAGATAATGAAGAACATAAGGATACTGAAATTGCATTCATGGGAATCAACATTCTTACAGAAACTTCTCCAATTGAGAGACACTGAGAAGAGCTGGCTGCAGAAGTACCTCTACACTCACTCAGCAGTAGCCACTCTTTTCTGGACTTCTCCAACTTTGGTTTCTGTTGTTACTTTCGGCATCTGCATACTGGTGAACACAGAACTGACTGCGGCTACTGTCCTCTCAGCCTTGGCAACTTTTCGGATTCTGCAGGAACCAATCTACAATCTTCCTGAGCTGATTTCCATGATAGCTCAAACAAAAGTCTCTCTTGATCGAATCCAAGAGTTGATCAATGAAGAGGATCAGAACCAGTTTGTGAACAAGCACACTTCAAAAGATTCATCAATTGTTATTGAAATCAAGCCAAGTGAATATGCATGGGAAACAAGTGATGGAACCAACAAGAAACCAACAATTCAAATCACAGAAAACTTGAAGATAAAGAAAGGTCAGAAGGTAGCAGTTTATGGTTCAGTGGGGTCTGGAAAATCAAGCTTACTTTGTTGTATGCTTGGTGAGATTCCATTGGTTTCCGGGACATTGATCAAAGTCTATGGAACAAGAAGTTATGTGCCACAGAGTCCCTGGATTCAATCAGGAACAATAAGAGAGAATATCCTGTTTGGAAAGGAAATGAACAAGGACTTCTATGAAAATGTTTTGGATGGCTGTGCTTTGCATCACGATATCAACATGTGGAGTGATGGAGATTTGAATCTTGTGGAGGAGAGGGGCATAAACTTAAGTGGAGGCCAGAAAGGCAGAAACAACGGATTCAACTCGCAAGAGCTGTTTACAATGATTCAGCTTCATTTCTTTCAAAGTACTTCACTAAGAACTGGACATGCTGTACAGAAATGCCTTATGCAACTTTTGTTTGAGAAGACAGTTGTTTATGCTACTCATCAACTAGAATTTTTGGAAGCTGCAGATTTAATTCTGGTAATGAAAGATGGAAAAATAGTGGAGTCAGGAAGGTATAAAGAACACATAGCATGTCCCAACTGTGAATTTGTTCGACAAATGGCTGCTCATGAAGAAACAATCAACCAAATAAATCCATGGCATGAAGAGAACTCTATTAGCTGCAGGCCCCTTCAAAAGAATCAAATTGAAGTTGCTGAAGAGAATCTTCAAGAAAGCATAAGCAATTGGAAGAGAAACAAAGAAGAAGAAGCAGAGACCGGTCGAGTGAAATGGAGTGTTTACTCAACCTTTCTCACATCTGCATATAGAGGATCACTTGTTCCGGTCATTCTTCTCTGCCAGATTCTGTTTCAAGTGATGCGAATGGGAAGCAATTATTGGATTTCTTGGGCTGCAGAACAAACTGGGAGGGTAACCAAAGGGATGCTTATGGGAACATTTGTTCTTCTTTCTGGTGGAAGCTCTATCTTTATACTTGGAAGGACTGTTTTGATGGCAGTGGTGGCTATTGAGACAGCTCAGCGTCTTTTTCATGGAATGATTACATCTGTTTTCAGAGCACCTGTTTCATTTTTTGATACCACACCATCAAGCAGAATCCTCAGTAGGTCATCAACAGATCAAAGTACAATTGACACAAACATACCATACAGATTAGCAGGGCTAGTGTTTGCACTAATTCAGTTGTTGAGTATGATCATGCTAATGTCGCAGGTCGCGTGGCAAGTCATCCTTGTGTTTCTTGTGGTGTTTCCTATCTCCATATGGTATCAGGCTTATTACATTACTACTGCCAGGGAATTAGCCAGGATAGTAGGGATCAGAAAGGCCCCAATCTTGCATCATTTCTCAGAATCTATTGCTGGGGCCGCCACGATTCGTTGTTTCAATCAAGAACAAATATTCATGACCAAAATCAAGGATCTTGTTGATGAATACTCTAGAGTAGCCTTTCATAATTATGCCATCATGGAATGTGAACAAATTTAA 2958 0.4033 MKNNFEYLDFWNFLSEDDNIVSVVSLPMLLLLLCLNLCAREKQHNTDMEQLLVHPGEEEDDDDDEDGENFTTAGIWSQLTFRWLNPIFRKGRVQKLELAHIPDVPHSETAENASSLLEESLGKQKLEGASLAKAITSSVWKSLALNAVFAGVNTIASYMGPLLITYFVNFLVDDNSNSSMDDNSNSSIQCGLILAFIFFLSKTLESLSQRQWYFGAQRIGIRVRAALMTLIYSKSLMIKCAGPTHGKIINLVNVDVERIGDFCWYIHGVWLLPVQVILGLVILYINLGFLPSISALAVTILVMVCNTPLANMQEKLHSKIMEAKDTRIKMTSEIMKNIRILKLHSWESTFLQKLLQLRDTEKSWLQKYLYTHSAVATLFWTSPTLVSVVTFGICILVNTELTAATVLSALATFRILQEPIYNLPELISMIAQTKVSLDRIQELINEEDQNQFVNKHTSKDSSIVIEIKPSEYAWETSDGTNKKPTIQITENLKIKKGQKVAVYGSVGSGKSSLLCCMLGEIPLVSGTLIKVYGTRSYVPQSPWIQSGTIRENILFGKEMNKDFYENVLDGCALHHDINMWSDGDLNLVEERGINLSGGQKGRNNGFNSQELFTMIQLHFFQSTSLRTGHAVQKCLMQLLFEKTVVYATHQLEFLEAADLILVMKDGKIVESGRYKEHIACPNCEFVRQMAAHEETINQINPWHEENSISCRPLQKNQIEVAEENLQESISNWKRNKEEEAETGRVKWSVYSTFLTSAYRGSLVPVILLCQILFQVMRMGSNYWISWAAEQTGRVTKGMLMGTFVLLSGGSSIFILGRTVLMAVVAIETAQRLFHGMITSVFRAPVSFFDTTPSSRILSRSSTDQSTIDTNIPYRLAGLVFALIQLLSMIMLMSQVAWQVILVFLVVFPISIWYQAYYITTARELARIVGIRKAPILHHFSESIAGAATIRCFNQEQIFMTKIKDLVDEYSRVAFHNYAIMECEQI 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01634 985 CDD ABC_6TM_ABCC_D1 145 440 IPR044746 GO:0140359
Aip01g01634 985 Pfam ABC transporter transmembrane region 145 419 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip01g01634 985 Pfam ABC transporter transmembrane region 769 974 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip01g01634 985 Gene3D - 465 605 IPR027417 -
Aip01g01634 985 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 16 981 - -
Aip01g01634 985 SUPERFAMILY ABC transporter transmembrane region 765 979 IPR036640 GO:0005524|GO:0016021
Aip01g01634 985 Gene3D - 619 693 IPR027417 -
Aip01g01634 985 PANTHER OS01G0902100 PROTEIN 16 981 - -
Aip01g01634 985 Coils Coil 715 742 - -
Aip01g01634 985 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 144 432 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip01g01634 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 490 678 IPR027417 -
Aip01g01634 985 Pfam ABC transporter 491 602 IPR003439 GO:0005524
Aip01g01634 985 Gene3D ABC transporter type 1, transmembrane domain 133 451 IPR036640 GO:0005524|GO:0016021
Aip01g01634 985 SUPERFAMILY ABC transporter transmembrane region 138 447 IPR036640 GO:0005524|GO:0016021
Aip01g01634 985 Gene3D ABC transporter type 1, transmembrane domain 695 982 IPR036640 GO:0005524|GO:0016021
Aip01g01634 985 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 467 690 IPR003439 GO:0005524
Aip01g01634 985 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 765 979 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip01g01634 985 CDD ABC_6TM_ABCC_D2 763 980 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01634 Aip-Chr1 61422290 61425720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01634 464 716 Calmodulin-binding Proteins AT2G36910 26.241 4.07e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01634 - - ahf:112722190 1876.68