Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01627 ATGGTTGCCGACACCATAGCCATCAACTACCACAGCGACCGGATCTTACCCGAACCGGATGTCTTCATTCGCACCTCCGCCGGAACACGTATTCCTGCCCACTCCAGTATTCTGGCTTCTGTGTCGCCGGTTTTGGAGAACGTCATAGACCGCCCGCGAAAACATCGGAGCTCCGAAAGAATCATCCAGATTCACGGCGTTCCCTGTGAAGCCGTAGCCGTCTTCGTCACCTTCATCTACACCTCCAGGTGCACGGAGGAGCAGATGGACAAGTACGGGGTTCACCTGTTGGCATTGTCGCACGTGTACAACGTGCCGCAGCTGAAGCAGAGGTGCACGAAGGGGCTGGCACAGCGCGTGACGGTGGAGAACGTGGTGGACCTACTTCAGCTGGCGCGTCTGTGCGACGCGCCGGATCTAGAGGTGAGGTGCATGAGGCTGCTCATGCGGCACTTCAAGGCGGTGGAGAACACCGAAGGGTGGAAGTTCGTTAACAACAACGATCCCTTGCTTGAACTCGATATCCTTCGCTTCATCGACGAACACGAAACGAGGAAAGAGAAATGCCGGAGGCACAGGGAGGAACAGAGGGTGTACTTTGAGCTAAGCGAAGCCATGGACTGCTTGGAACACATATGCACCGAAGGCTGCACCGACGTTGGGCCATGCCACGTGGACACCAGAAAGGAAAGGAGGAACCCCTGCAGCAGATTCAACACGTGTCACGGCCTCCAGCAACTGATTCGCCATTTTGCCACGTGTCAGAAGAGGATGAAGCTGGGGTGCCTTCGGTGCAAGCGAATGTGGCAGCTCTTCAGGTTACATGCCTACGTTTGCCAGCAAACTGATTCTTGCAAGGTTCCTCTTTGCAGGCAAATTCAATTGAAGATGCAACAAGAGAAGAGAAAAGACGATTCAAGGTGGAAATTACTAGCAAAGAAGGTAGCCTCAGCCAGAGTCATATCATCTTTGTCTCTTCCAAAGAGAAAGCGTGATGAGGAAACTAAAGTCACCATGGACAATAATGGCTTCACAAGTTTTGAGTTACATTGA 1053 0.529 MVADTIAINYHSDRILPEPDVFIRTSAGTRIPAHSSILASVSPVLENVIDRPRKHRSSERIIQIHGVPCEAVAVFVTFIYTSRCTEEQMDKYGVHLLALSHVYNVPQLKQRCTKGLAQRVTVENVVDLLQLARLCDAPDLEVRCMRLLMRHFKAVENTEGWKFVNNNDPLLELDILRFIDEHETRKEKCRRHREEQRVYFELSEAMDCLEHICTEGCTDVGPCHVDTRKERRNPCSRFNTCHGLQQLIRHFATCQKRMKLGCLRCKRMWQLFRLHAYVCQQTDSCKVPLCRQIQLKMQQEKRKDDSRWKLLAKKVASARVISSLSLPKRKRDEETKVTMDNNGFTSFELH 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01627 350 Gene3D Potassium Channel Kv1.1; Chain A 16 120 IPR011333 -
Aip01g01627 350 CDD BACK 121 162 - -
Aip01g01627 350 SUPERFAMILY POZ domain 20 118 IPR011333 -
Aip01g01627 350 ProSiteProfiles BTB domain profile. 19 88 IPR000210 GO:0005515
Aip01g01627 350 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 1 348 IPR044513 -
Aip01g01627 350 Gene3D - 121 193 - -
Aip01g01627 350 Gene3D TAZ domain 194 301 IPR035898 -
Aip01g01627 350 SMART TAZ_2 196 291 IPR000197 -
Aip01g01627 350 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 1 348 - -
Aip01g01627 350 Pfam TAZ zinc finger 203 290 IPR000197 -
Aip01g01627 350 SUPERFAMILY TAZ domain 194 294 IPR035898 -
Aip01g01627 350 Pfam BTB/POZ domain 19 118 IPR000210 GO:0005515
Aip01g01627 350 SMART BTB_4 19 120 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01627 Aip-Chr1 61001060 61006015 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Aip01g01627 BTB 3.1e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01627 - - cam:101496955 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01627 01 61001060 61006015 Aip01g01627 01 61001060 61006015 ECH
Aip01g01627 01 61001060 61006015 Aip01g01627 01 61001060 61006015 PCT