Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01625 ATGCCTTTCAGGAAACGCTGTTTGGTTGCCTTTGTTGGGTTCCCTTCTGCATTCAGCGGTCGCCTTCGTTCTCGTTCTTTGGCATCCTCGATCGATCGGCCTTCACCGCTCGCGTTAGTCGCCGTTCACCGTTCGAGTTCGTGCAAGCGTTCGTGTGGAAGCCACGTCGGTTTCGTTCGACCACTGGGACGAAACCGCGAGCGACCCCCGGATGTGGTACTGCTAGCTTTTGTCGCCTCTGTGAGTTTTCCAAACCCGCCACCAGATAATACACCCACACATCACCAATACTCTGCTTCAACCTCTACAACTTTCGATTACCAATACAATAGTCGATGTGTTGTTGAGGTACAGATGGAGGTGAACTTAAGCGAGGAGGATGCTGATTGTCGAGGGACTCAAAGTGATGCGTACGACGAGTTCATCGGTGCCGAAGAAGGAGGAGCCATGGCCGACGATGAATGTTGTGACTTTGAAGACCTGGGCGCACTGAGTGTGGATGATATTTTGAAGAAGGTTTGGGTCAGCGTTGAGAGTGCATATGAGTTCTATCGGAGGTTTGGAAAAATGCATGGGTTCAGTGTGCGAAAGGGTGACTCAGGGAGAGACTGTGAGGGGAACTTGGTAAGATATAGGTTTTTTTGTAACAAGGAAGGGTTGAGGGAACGAAAACACTATGACAGGATTGACAGAAGGGGGGAACACAAACCAGAGACAAGAACTAACTGCAAGGTAATGTTATCAGTTTTTTTAGACAAAAATGATAACTGCTGGAAGGTGAGGAAGCTAGTCACCGAGCACAACCACGAGTTGACACCGGCAGGAATGGTGCACTTGATTGCAAATCATCGTGGGTTAACGGAAACAACAAAGAGTCAGATAGATGGGATGCAAGCACATTGTATTGCAACGGCTAAGATTGTAGGGTACATGGCTGGTATGGCCGATAGCTATTCGTTGTTAGGGTTTCTGAAGAAGGATGTCTACAACTACGCTGACAAACAACGGCGCATTAAAATATCTGACGGTGACGCAAATTCTGCAATAGTGTATCTTGAGGGAAAAGCCGAGTTAGACCCCATGGAAATCGCAAAATACAACGTGACTTGTGACAAAAGGCTAGCCAATCTGATTTGGGCGGACGGATCCAGCAGAGTCGATTACCAATACTTTGGTGATGTATTGGCCTTTGATTCAACATACAAGAAAAACAAATACAAGAGACCAGTCGTGATTTTTTCTGGATCAAACAATCACAAGCAGACCACCATCTTTGGGTTTGGGTTGTTGCTTGATGAAACTATTGATTCATATCGGTGGATGTTGGAGCATTTGACGAAGATCATGTGTGGTAAGAAGCTGGCTGTAGTTGTGACTGACTGCGACAAGGCTATGATAAAAGCAGTTTTCGAAGTGCTTCCCTCTGCGACCCATCGTTTGTGTGCATAG 1449 0.4686 MPFRKRCLVAFVGFPSAFSGRLRSRSLASSIDRPSPLALVAVHRSSSCKRSCGSHVGFVRPLGRNRERPPDVVLLAFVASVSFPNPPPDNTPTHHQYSASTSTTFDYQYNSRCVVEVQMEVNLSEEDADCRGTQSDAYDEFIGAEEGGAMADDECCDFEDLGALSVDDILKKVWVSVESAYEFYRRFGKMHGFSVRKGDSGRDCEGNLVRYRFFCNKEGLRERKHYDRIDRRGEHKPETRTNCKVMLSVFLDKNDNCWKVRKLVTEHNHELTPAGMVHLIANHRGLTETTKSQIDGMQAHCIATAKIVGYMAGMADSYSLLGFLKKDVYNYADKQRRIKISDGDANSAIVYLEGKAELDPMEIAKYNVTCDKRLANLIWADGSSRVDYQYFGDVLAFDSTYKKNKYKRPVVIFSGSNNHKQTTIFGFGLLLDETIDSYRWMLEHLTKIMCGKKLAVVVTDCDKAMIKAVFEVLPSATHRLCA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01625 482 PANTHER OS02G0262500 PROTEIN 168 481 - -
Aip01g01625 482 Pfam FAR1 DNA-binding domain 182 272 IPR004330 -
Aip01g01625 482 Pfam MULE transposase domain 394 481 IPR018289 -
Aip01g01625 482 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 168 481 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01625 Aip-Chr1 60895937 60898733 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01625 FAR1 1.2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01625 - - aip:107620053 561.607