Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01603 ATGGCTGCTTCTGCTTCTTCTTCTTCGACTTCATCTTCTAAGAAGGATTCAGTGTACCGCGGAATCCGGTGCCGAGGAGGGAAATGGGTATCCGAGATCCGAGAGCCGAGAAAGACGACCCGAATATGGCTCGGCACCTTTCTCAAGCCGGAGATGGCTGCGGCAGCCTATGACGTGGCAGCACTGGCACTCAAGGGTGCAGAAGCGCCCTTAAACTTCCCTGCCATGGTAGGGAAGTATCCAATGCCAAAGTCTAGTTCCGCAGCTGACATCCGCAGCGCTGCCACCGCTGCGGCGCAGCTGATTATGGCTGAACTTGCATCACCAACCAACAATAATGCAGTTCAGCCTAACATTGATAGTGAAAAGAATAATAATAATAATAATGATGATAATGATAACAATAACACTAATAATGATAGTGCTGCTCCTTTGTGTGAAGATGAACCGGTTGAGTTTTTGGACGAAGAAGCAATTTTCTCCTTGCCGAGTTTGCTGGTCGATATGGCAGAGGGAATGCTGCTTTCTCCACCCAGAATGAGTCCGTCGTCGCCTGACTCGCCGGAAAATTATTCCGGCGGAGGAGACAGTTTGTGGAACTACTAA 606 0.4917 MAASASSSSTSSSKKDSVYRGIRCRGGKWVSEIREPRKTTRIWLGTFLKPEMAAAAYDVAALALKGAEAPLNFPAMVGKYPMPKSSSAADIRSAATAAAQLIMAELASPTNNNAVQPNIDSEKNNNNNNDDNDNNNTNNDSAAPLCEDEPVEFLDEEAIFSLPSLLVDMAEGMLLSPPRMSPSSPDSPENYSGGGDSLWNY 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01603 201 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Aip01g01603 201 SMART rav1_2 18 80 IPR001471 GO:0003700|GO:0006355
Aip01g01603 201 MobiDBLite consensus disorder prediction 185 201 - -
Aip01g01603 201 MobiDBLite consensus disorder prediction 174 201 - -
Aip01g01603 201 CDD AP2 17 75 IPR001471 GO:0003700|GO:0006355
Aip01g01603 201 PANTHER ETHYLENE RESPONSE FACTOR 7 201 - -
Aip01g01603 201 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 201 - -
Aip01g01603 201 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Aip01g01603 201 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Aip01g01603 201 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Aip01g01603 201 MobiDBLite consensus disorder prediction 110 143 - -
Aip01g01603 201 MobiDBLite consensus disorder prediction 110 144 - -
Aip01g01603 201 ProSiteProfiles AP2/ERF domain profile. 18 74 IPR001471 GO:0003700|GO:0006355
Aip01g01603 201 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01603 Aip-Chr1 59421803 59422706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01603 5 201 AP2-EREBP Transcription Factor Family AT5G52020 50.249 1.34e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aip01g01603 AP2 1.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01603 - - adu:107489031 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01603 01 59421803 59422706 Aip01g01603 01 59421803 59422706 ECH