Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01593 ATGTGGATGGATGGAACGGCGTCGTTTCATGATTTGAAGGTTGAAAACGTTTGGCTCCGTGGAGTTCGCTGCCACTGTGATAGTGTTGTGCGGTCGTTGTTGGTGAAGGAAGGAGAAGCAGTTCATCGTGATCACACGAAGGACATAGCAGGACCTGCTGcacctgcaccaccaaggccacaaaaAGGAGCTGAGAGGGGTGGAAAAGAAGGATGGTTTTATCTCAGCTCATCCACAAAGGATACTCCATCGTCAAACGACGCATACCCCAGAATTCTTGGGGCTGCAGCAACAAATGGGACTGTGGAAACAATCAAATCTCGGCAAGGGGGTTATTATTGGGGTGGTGGACTCTTCAACGTTGCAGCAACAGCAATGAATGGAACTCAAAATGTGCCACCTATTGATGAAGATGGACATGGGACTCACACAAGCAGCACTGCAGCTGGTGCCTTTGTGGATTATGCAGAAGTATTGGGAAATGCCAAAGGCACAGCTACAGGGATGGCTCCTTTGTCTCACGTGGCAATGTATAGAGTATGCTTCGGAGATCCCTGCCCCGAGGCTGATATACTGGCTGCATTAGATGCAGCCGTGGAGGATGGGGTCGATATAATATCAATATCCCTTGGCCTAAGCGAGCCACCTCCATTTTACAATGATAGCACTGCAATAGGTGCATTTGCAGCAATTCAGAAAGGAATATTTGTAAGTTGTGCAGGAGGAAATCTTGGCCCCTCTAATAGCACTATAGTTAATGGAGCCCCATGGATTCTCACTGTTGGAGCAAGCACTATTGACAGAACCATTGTAGCAACAGCAAAGCTTGGAAACGGGGAAGAATTTGATGGTGAATCTGTTTTCCAGCCTTCTAGTTTTCCTTCAACATTGCTGCCCTTGGCATATGCTGGCAAGAATGGCAACCAACAATCTGCAGTATGCGCTAACAGATCCTTGAGTGACACTGACTTCAGAGGAAAAGTTGTTTTGTGCGAAAGAGGAGGAGGAATAGCAAGAATTGCAAAAGGGGATGAAGTGAAAAGAGCTGGTGGGGCTGCCATGATTCTCATGAATGATGAAATCAGTGGCTTCAGTCTATCAGCTGATGCACATGCGTTACCTGCGACACATGTAAGCTATGCTGCTGGATTGAAGATAAAAGGCTATATAAATTCCACCGCGACACCTACAGCCACCATTTTATTTAAGGGAACTATCATCGGAAACTCCCTGGCTCCTGCTGTTACATCCTTCTCATCAAGAGGTCCGAATTTGCCGAGTCCTGGTATTTTGAAGCCAGATATCATAGGGCCAGGCAGTAGCATATTAGCTGCCTGGCCATTCCCCCTCGACAACAGCACTGATTCTAAATCCACCTTCAACATTATGTCCGGCACATCAATGGCATGCCCACATCTCAGCGGAATTGCTGCTTTGCTAAAAAGCTCTCATCCTGACTGGTCACCAGCAGCCATTAAATCTGCCATAATGACTTCTGCAGACACGCTAAATTTAGAACACACACCCATCGTTGATGAGAGAAATCAACCTGCAGATCTCTTTGCCACAGGTTCCGGCCATGTGAATCCATCGAGAGCAAATGATCCAGGACTAGTTTATGATATTGAACCTGATGATTATATACCTTATCTTTGTGGTTTAGGCTACAGTAATAGGGAAATTGGGTACCTTGCACAGAGAACAATTAAGTGCTCTGAAACATCAAGCATTCCTGAAGCACAACTCAATTATCCCTCATTTTCTATTGCACTTGGTTCCTCGCAGACATTCACAAGGACTGTGACAAATGTTGGTGAGGCCTACTCATCTTATGATGTCATGGTTACAGCACCAGAAGGGGTTTCTGTGACAATCCAGCCAAATAAACTTAACTTTTCGGAAATAAACCAAAAAGAGACATATTCAGTGGCATTCAGCCGTACAGATTCAGCTGATAAGACAGCAGATTATGCTCAAGGGTCACTAGCATGGGTCTCTGCCAAACACATTGTAAGAAGCCCTATCTTGGTAAAGTTTGTATAA 2043 0.4493 MWMDGTASFHDLKVENVWLRGVRCHCDSVVRSLLVKEGEAVHRDHTKDIAGPAAPAPPRPQKGAERGGKEGWFYLSSSTKDTPSSNDAYPRILGAAATNGTVETIKSRQGGYYWGGGLFNVAATAMNGTQNVPPIDEDGHGTHTSSTAAGAFVDYAEVLGNAKGTATGMAPLSHVAMYRVCFGDPCPEADILAALDAAVEDGVDIISISLGLSEPPPFYNDSTAIGAFAAIQKGIFVSCAGGNLGPSNSTIVNGAPWILTVGASTIDRTIVATAKLGNGEEFDGESVFQPSSFPSTLLPLAYAGKNGNQQSAVCANRSLSDTDFRGKVVLCERGGGIARIAKGDEVKRAGGAAMILMNDEISGFSLSADAHALPATHVSYAAGLKIKGYINSTATPTATILFKGTIIGNSLAPAVTSFSSRGPNLPSPGILKPDIIGPGSSILAAWPFPLDNSTDSKSTFNIMSGTSMACPHLSGIAALLKSSHPDWSPAAIKSAIMTSADTLNLEHTPIVDERNQPADLFATGSGHVNPSRANDPGLVYDIEPDDYIPYLCGLGYSNREIGYLAQRTIKCSETSSIPEAQLNYPSFSIALGSSQTFTRTVTNVGEAYSSYDVMVTAPEGVSVTIQPNKLNFSEINQKETYSVAFSRTDSADKTADYAQGSLAWVSAKHIVRSPILVKFV 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01593 680 Gene3D - 551 679 - -
Aip01g01593 680 ProSiteProfiles Serine proteases, subtilase domain profile. 1 534 - -
Aip01g01593 680 Gene3D - 267 408 - -
Aip01g01593 680 Pfam Subtilase family 133 503 IPR000209 GO:0006508|GO:0008236
Aip01g01593 680 SUPERFAMILY PA domain 296 392 IPR046450 -
Aip01g01593 680 Gene3D Peptidase S8/S53 domain 122 547 IPR036852 GO:0004252|GO:0006508
Aip01g01593 680 Pfam Fibronectin type-III domain 581 677 IPR041469 -
Aip01g01593 680 Pfam PA domain 311 386 IPR003137 -
Aip01g01593 680 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 130 677 IPR045051 -
Aip01g01593 680 SUPERFAMILY Subtilisin-like 113 538 IPR036852 GO:0004252|GO:0006508
Aip01g01593 680 MobiDBLite consensus disorder prediction 44 69 - -
Aip01g01593 680 PRINTS Subtilisin serine protease family (S8) signature 464 480 IPR015500 -
Aip01g01593 680 PRINTS Subtilisin serine protease family (S8) signature 136 149 IPR015500 -
Aip01g01593 680 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 130 677 - -
Aip01g01593 680 CDD PA_subtilisin_like 273 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01593 Aip-Chr1 58732288 58739887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01593 134 679 Subtilisin-like Serine Gene Family AT5G67360 47.576 1.13e-163 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01593 - - gmx:100812208 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01593 01 58732288 58739887 Aip05g00955 05 13238218 13246834 PCT