Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01591 ATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAAAATGAATTCGAACGAGATTTCGGAGATGAATTTACTGAGGGAGCGTATTTTTCTGAATCTGATCAATCAGAAGATATCCTTGAAGCTGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAAATTTAGTGAAAATTTTGCGGAGGAAATTGGCAAATATCACTTTTCTACTTTGCAGCTTGCATTTGATTTTTATCTGAAGTACTCAAAGTCGAAGGGTTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTATTGGCGAGATTTACAAACAAAAGTTTTTATGTCATAGGCAAGGATTCAGGGAGGAGAAATATTACACGATGGAAAAAAGGAAGAATGAGCCTAGATTAGAAACAAGAACTGGATGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAACTGGAAGGTGGCATATCTTTTATTTCTTTGACGAACACAACCATGATCTATTAGATACACAATTCAGTGCTATGTTTCCTGTCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGGGATTAGCACTTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTATGAATTTGTTGGCTATGGTCCCAGAGATATGTACGATGAGATTGCTCGGCAAAGGCGTCAAATTCCTGGTGATGCAGCATGA 765 0.3882 MNEQYQEDDDFNQQEELVSDQDMMDEQNEFERDFGDEFTEGAYFSESDQSEDILEAAYAVDSVQDITTLKFSENFAEEIGKYHFSTLQLAFDFYLKYSKSKGFSARKSKTFKNSIGEIYKQKFLCHRQGFREEKYYTMEKRKNEPRLETRTGCEARMDVKFVPETGRWHIFYFFDEHNHDLLDTQFSAMFPVHRKMSEADIMQMMNMLKSGISTSQIFGLLASQAGGYEFVGYGPRDMYDEIARQRRQIPGDAA 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01591 254 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Aip01g01591 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 210 - -
Aip01g01591 254 MobiDBLite consensus disorder prediction 1 20 - -
Aip01g01591 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 6 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01591 Aip-Chr1 58653595 58654359 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01591 FAR1 6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01591 - - aip:107607217 520.776