Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01589 ATGTTAGAGGGATTTGAGATTCATCAAGAGAATAATGAAGGAAGTGGCGGTAAGAGTAGTAATGATAATGAGGGTGAGGAAAATTCATTTGACTTGAATGAAGGAGCGGCTATGAGTGATGATGAGGAATTGGAAGAAGAGAATAATAATGAAGCAAAGGAGGATGAGGAGGATAACAATGAAGAAGAAGGGAATTCAACAAACCCAAGTAGCAGTAGCACAGCATCAAGAGAAGGGAAGAGAGGGAGTGGTGTGAACCAATATGTGAGATCAATGATGCCACGGCTTCGTTGGACTCCTAATCTTCATCTCTCATTTTCCCATGCTGTTCAGAGGCTTGGAGGAGCAACACCTAAATTGGTGCTTCAGCTAATGAATGTCAGAGGCCTAAGCATTGCTCATGTCAAGAGTCACTTGCAGGAGTTAATTGATTTTCTAAAAGAAACTGGGCTGCAGTCAAGTGCAGCTGCCACTAGAAATGCTTCAACTAAGCTTTTGGGTGTTCTACATAGATTTATATTAAAGGGTTCCTTACTGATGTTAAGCCTGCATTGCTCAAGGCTCTTGATACTGAGTATGAGAAGAATCCATGAGGGAGCATCTGCAGCTCCCAAGGGATCAGTCAACACATCAGAATCATCTTCCTTAGTTGCTGCTGGTGGCTTGGATAGCTTGCCTCGTGAAGACATTAGTGGAAAGATTACTCCTACTCTCTTGAAGAGCTTGGAAAGTCCTGAGTTGAAAGTTCGTATGGAGTCTATTGAAGCTGTAAATAAAATATTGGAAGAGGCAAATAAGCGCATTCAAGCAAATGGAACTGGGATACCAACATACAAAGCTGCTTTAACTTTGCTTATGGTATTTGGTGTTGGACCAACAGTTTTTGGCATTATGTCTAATATCCATAAACTTGTGAGGAAAAAAAATGGAAGCATGTTACGTGCCTTCATTGCCTTGGCTTTGATCAAGTTCAAGCAACCTTGGCTTTGGTCGAGTTCAAGCAAGAGTAAGGGCTAA 1017 0.4159 MLEGFEIHQENNEGSGGKSSNDNEGEENSFDLNEGAAMSDDEELEEENNNEAKEDEEDNNEEEGNSTNPSSSSTASREGKRGSGVNQYVRSMMPRLRWTPNLHLSFSHAVQRLGGATPKLVLQLMNVRGLSIAHVKSHLQELIDFLKETGLQSSAAATRNASTKLLGVLHRFILKGSLLMLSLHCSRLLILSMRRIHEGASAAPKGSVNTSESSSLVAAGGLDSLPREDISGKITPTLLKSLESPELKVRMESIEAVNKILEEANKRIQANGTGIPTYKAALTLLMVFGVGPTVFGIMSNIHKLVRKKNGSMLRAFIALALIKFKQPWLWSSSSKSKG 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01589 338 Gene3D - 93 143 - -
Aip01g01589 338 SUPERFAMILY Homeodomain-like 94 147 IPR009057 -
Aip01g01589 338 MobiDBLite consensus disorder prediction 64 81 - -
Aip01g01589 338 MobiDBLite consensus disorder prediction 1 84 - -
Aip01g01589 338 MobiDBLite consensus disorder prediction 36 63 - -
Aip01g01589 338 Coils Coil 41 65 - -
Aip01g01589 338 Coils Coil 251 271 - -
Aip01g01589 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 29 140 IPR044848 GO:0003700
Aip01g01589 338 Gene3D - 222 287 IPR011989 -
Aip01g01589 338 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 29 140 - -
Aip01g01589 338 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 94 142 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01589 Aip-Chr1 58328298 58330875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01589 58 140 G2-like Transcription Factor Family AT2G42660 61.628 9.13e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip01g01589 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01589 K16803 - aip:107618142 275.018