Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01581 ATGGATTTCAGCAGTTTCTTTGATAGTGAGGGTGAAGACTCATTTGGGAGTGCCTCTGATGATGGTCGCGGACGTTATAGTGCGAGTGATGATGACTATGATGACGACGAGAACCTCGAGTGCAATGAGGCCCACGAAGGCGGGGAAAATAGTGAAGGCGGGGCCGATGATCGTAATGGGACGGGTGATGCAGATGATGCATCAGAGGGTGGTCTCCGCCAGCCGGTCGGGGCGAATGACTTCTTGGGAAAAGAGTTTGCAACGGAGGAGGATGCCTATGCTGCCTACAAGGAATTTGCTAAAATAAGGGGTTTTGGAGTACGGAAGGGAGATGTGGCTCGTGTGGATGGGGTGTTGATTAGGCGAGATTTTTTCTGCCATCGACAAGGTACAAGACATGCTAAGCACTACGACCGTCCTGAGCGAGTAAGGGAGGAGAGGTTGGAGAGTCGCACAGACTGTAAGGCCAAGTTGAAGATTTACTATGATATGCAGCATAGTGTATGGAGGGTCAGGACCATCGTCGACGAACACAACCACGAGCTTGCTCCAGCAGTGTTCGCACGTCTCCTTCCTAGTCATCGGAAGATGAGTGACGGTGACAAGGCACAGGTGGATAGTTTCAAGCAGTTTGGGATCCCCACGTCGAAGATAATGGCTTACATGGCGGGACAGTCTGGTGGGTATGGCATGCTCCGATTTACGAAACGGGATCTGTATAATTATGTCCATGGGCAAAGGGTTGCGCGAATATGCGACGGCGACGCTGCGGCGACTATCAGTTACTTGGAGGGAAAGGCAAATGCTGACATGAGGACGGTGGCCCGATACACACGGACGTCGGACAATCGTCTGGGTAGCCTAATCTGGGCTGACGGTGAGATGATGATGGATTATCAGCTATTTGGTGACGTGTTGGCTTTTGATTCGACGTACCGATCTAACAATTATAGGAAACCATTGGTGGTTTTCTCTGGGACAAATCACCACAAACAGACTTCGATATTTGGGTTCGCGTTGCTGGAGGATGAAGAGGTCCGCGCTTATAGGTGGGTGTTAATGAACCTGCTCGATGTCATGGGGCAGAAGATGCCTTGTGTAGTGGTTACCAACGGAGACAAGGCGATGCGCTCTGCAATTGCGGAGGTGATGCCGACGGTGACACATAGACTCTGTGGTTGGCACCTGGAGAAGAATTGCGTGCAACGGGTGAAAGAAGCAGAATTTCGCAAGGTGTTTCGGAAAGCGATTTATGCAAACTTTGAAATCTGCGAGTTTGAGGAGTATTGGAAGGCATCGGTCGAGTCGCTTGGCCTACATGATAACACTTGGGTTAAGTCCACGTATGAAAGTAGACATAGTTGGGCAACAGCGTACCTTAGGGGAACTTTTTGTGCGGGATATAGAACGACCTCTAGATGTGAAGGGATAAATGCTTTCATTAAGGGTTTCCTTAAATCAACCGATAGCATTTTGGAACTTGTGCATAGTTTGGATCGGGTTGTAAAGAACTACCGGAATAATGAAATAACAGCCCAATTCTACTCCACGTACTACAGTCCAGTGCTGACCACCAGCCTTGATTCGATCGAGCGGTTTGCATCGAAGGTGTATACAAGAGCAGTGTTTAGAGAAGTGAAGAAACAAATCAAGGCTGTGGCCACGCTATTGTTTCGGGGGAAGGATAGCATCAGCACGACAACTGTGTACACATTCTCGCGGATGGGGAAACCCAACAGAAAACACAAGGTATTGTTTGACCCGAACGAGGAAAAAATAGAGTGTGAGTGTTCCATGTGGAACAGTGAAGGGATTCCATGTAGCCATATCTTCTGTGCGATGAAGTACGAGGGTTTGGAAGAAATCCCGCCCGGTCTTATTCTAAGAAGATGGTGCAAGGATGCGAAGGATTGTAGATCCACCCAGGTTGATAATAAAGACGGCCCTGAAGGCCGCTTGCTGCGATACGGTGCCCTTTTTGGGGCAATGAGTTTAGTTGCGCAACTTGGGGCCGAAGATGCTGCAGAGTTTGTTGTGGCTAGGGATGGGATTGCCAGTCTAATCGAAACCCTTCAGCGGAGACACTTTGACAAGGTTGGGAGCAAACTTGGTCTATCGCCGTTATCCCAGATCAAGGACCCCGTTGTATCAAAGACAAAGGGGGCACCGAGGAAGGGAAGGAGTTAG 2187 0.4938 MDFSSFFDSEGEDSFGSASDDGRGRYSASDDDYDDDENLECNEAHEGGENSEGGADDRNGTGDADDASEGGLRQPVGANDFLGKEFATEEDAYAAYKEFAKIRGFGVRKGDVARVDGVLIRRDFFCHRQGTRHAKHYDRPERVREERLESRTDCKAKLKIYYDMQHSVWRVRTIVDEHNHELAPAVFARLLPSHRKMSDGDKAQVDSFKQFGIPTSKIMAYMAGQSGGYGMLRFTKRDLYNYVHGQRVARICDGDAAATISYLEGKANADMRTVARYTRTSDNRLGSLIWADGEMMMDYQLFGDVLAFDSTYRSNNYRKPLVVFSGTNHHKQTSIFGFALLEDEEVRAYRWVLMNLLDVMGQKMPCVVVTNGDKAMRSAIAEVMPTVTHRLCGWHLEKNCVQRVKEAEFRKVFRKAIYANFEICEFEEYWKASVESLGLHDNTWVKSTYESRHSWATAYLRGTFCAGYRTTSRCEGINAFIKGFLKSTDSILELVHSLDRVVKNYRNNEITAQFYSTYYSPVLTTSLDSIERFASKVYTRAVFREVKKQIKAVATLLFRGKDSISTTTVYTFSRMGKPNRKHKVLFDPNEEKIECECSMWNSEGIPCSHIFCAMKYEGLEEIPPGLILRRWCKDAKDCRSTQVDNKDGPEGRLLRYGALFGAMSLVAQLGAEDAAEFVVARDGIASLIETLQRRHFDKVGSKLGLSPLSQIKDPVVSKTKGAPRKGRS 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01581 728 Pfam SWIM zinc finger 583 610 IPR007527 GO:0008270
Aip01g01581 728 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 80 641 IPR031052 GO:0006355
Aip01g01581 728 MobiDBLite consensus disorder prediction 1 78 - -
Aip01g01581 728 Pfam FAR1 DNA-binding domain 96 183 IPR004330 -
Aip01g01581 728 ProSiteProfiles Zinc finger SWIM-type profile. 582 618 IPR007527 GO:0008270
Aip01g01581 728 SMART 26again6 593 620 IPR006564 GO:0008270
Aip01g01581 728 MobiDBLite consensus disorder prediction 43 64 - -
Aip01g01581 728 PANTHER OS02G0262500 PROTEIN 80 641 - -
Aip01g01581 728 Pfam MULE transposase domain 305 399 IPR018289 -
Aip01g01581 728 MobiDBLite consensus disorder prediction 16 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01581 Aip-Chr1 57960900 57963086 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01581 MULE 3.4e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01581 - - aip:107607194 1469.52