Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01574 ATGGAGCCGTCAGATAGCGATTTTTTTGGAACACACTCCGATGAGGAGTTCCCAAGAGGAGACGAACTAGAGTTTTTAGGCGACGATTTGGAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTGTGTAATTATGCGCCAAATTGTTTGCAATCGGGTGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCAACCCCTAAATCGAAGTTGTTGTCTTGCGAGAATTCGTGCAAGACTAGATAGAAAAATTCATAAATGGAAGGTTGTTTCATTATACGAAGAGCACTCTCATGGATTAGTTGATCCACTCGACATTAACATGATGTCTGAGTATCGCACATTTAGTGTCTCGAATAAAGCTCAGGCGAAGAATTTGCACGACATAAGCATCAGGACCTGTCACATCTTGGAATACTTGGCTACTAAAAAGGGATGTCTTGCATTTAATTCGACTTACAATAGGAACATCTACAATAAACCACTTGTGATATTTTCTAGTAGCAATCATCATGGGAACACCGTCATATTTGGATGTGGTCTTCTTGTTAACGAGGATATTGGTTCATATAAGTGGCTGTTGAAAACTTTTTTGGAAGCAATGGGGAATAAATATCCTATGGCAGTTGTCACCGACGGAGATCTTTCAATGAGAGAAGCCATTAAACAAGTATTTCCTTATGCAACACATCGACTATGTGCATGGAACTTACACAGGCATGCATGCGAGAAGGTTAAGAATAGTGGATTTCTAAATGACTTCAGGAAATTAATTTATGATAATGTGAGTGTTGAAGAGTTTGAGGTCATGTGGGGAGACATGGTGGCGAGGTATAACTTATCAAGCAACTGTTGGGTCGACCAAACCTATAAGTTGAGGAATTTATGGGCTCTTGCATATTTGAGGAACCAATTTTTTAGGCGAATCAGGACAACATCCCAGTGTGAAGGGATTAACTTTCTAATAAAAGTATATGTGAGAAAGAAAGATACCCTTCTTGAATTCATCAATAACATGGAGACTGTTGTTAGCCATTATAGGAACAATGAAAGAGATGCAGAGTTCAATAGTAAATATACCGATCCAGAACTTGTGACTTCTTTGCCGGCACTTGACGGTTTTGCTGCAAAGAATTTCACTCGTAACATGTTCCAGGAGGTCAGGAAGGAAATTGAGGGTGCTTGTGCTATGAACACAGAGTTGgatcttgttatttag 1266 0.4005 MEPSDSDFFGTHSDEEFPRGDELEFLGDDLETYAMMHGFAVRLDEVRRDSDGCVIMRQIVCNRVGSRKEEVEKDERIRDHQPLNRSCCLARIRARLDRKIHKWKVVSLYEEHSHGLVDPLDINMMSEYRTFSVSNKAQAKNLHDISIRTCHILEYLATKKGCLAFNSTYNRNIYNKPLVIFSSSNHHGNTVIFGCGLLVNEDIGSYKWLLKTFLEAMGNKYPMAVVTDGDLSMREAIKQVFPYATHRLCAWNLHRHACEKVKNSGFLNDFRKLIYDNVSVEEFEVMWGDMVARYNLSSNCWVDQTYKLRNLWALAYLRNQFFRRIRTTSQCEGINFLIKVYVRKKDTLLEFINNMETVVSHYRNNERDAEFNSKYTDPELVTSLPALDGFAAKNFTRNMFQEVRKEIEGACAMNTELDLVI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01574 421 Pfam FAR1 DNA-binding domain 32 117 IPR004330 -
Aip01g01574 421 PANTHER OS02G0262500 PROTEIN 32 157 - -
Aip01g01574 421 Pfam MULE transposase domain 163 254 IPR018289 -
Aip01g01574 421 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 164 410 IPR031052 GO:0006355
Aip01g01574 421 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 157 IPR031052 GO:0006355
Aip01g01574 421 PANTHER OS02G0262500 PROTEIN 164 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01574 Aip-Chr1 56493462 56497415 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01574 MULE 2.2e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01574 - - aip:107607106 758.444