Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01572 ATGCTGCTGGCTGCGCAAGTGATCGAAATTCTAGTAATTAGCGGGTGGGTGACGGCAACGATGCTGCCGCTGTTTTACGGGCTTCAAAAGATGAGCCTGTTGAAGATATTGAGGGAAGATGAGACGGCGGGTATGGATTTGACGAGGCACGGTGGGTTTGCTTATGCATATCATGATGAAGACGATGGGTTTGCATGGCCCGCCATGTATATGATGGGCAGGATTGAGCCCTCTCCTCAAACCAATCCACTGGTGTACGTGGCCGGAGCTCCACTCTTGTCCGGTGAAGGTGTTGAGACCGAAGTGGAAGAAGAGGGACATGTGGCTCAGCTGCCATTAGATTTGGAAGGCGTTTGGGAGGGGCAATATGGGAAGTAG 378 0.5212 MLLAAQVIEILVISGWVTATMLPLFYGLQKMSLLKILREDETAGMDLTRHGGFAYAYHDEDDGFAWPAMYMMGRIEPSPQTNPLVYVAGAPLLSGEGVETEVEEEGHVAQLPLDLEGVWEGQYGK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01572 125 Pfam Ammonium Transporter Family 2 55 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aip01g01572 125 PANTHER AMMONIUM TRANSPORTER 2 80 - -
Aip01g01572 125 PANTHER AMMONIUM TRANSPORTER 2 80 - -
Aip01g01572 125 Gene3D Ammonium transporter AmtB like domains 1 63 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01572 Aip-Chr1 56450447 56450913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01572 2 82 Inorganic Solute Cotransporters AT1G64780 62.963 1.86e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01572 K03320 K07573 gmx:100797209 123.25