Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01514 ATGGCTTCTGAGCATAACAACGACAACAGCACAAGCTACCAACCTTCGGAGCCAAGACCATGCACCAACGGTTGCGGCTTCTTCGGCACCGCCGGCAACAGAGACCTCTGCTCCAAGTGCTTCAGAGATCTTTTTCTTGAAGAACAGCGTGCCGCTTCAGCCAAAGTCGTCGTTGAGAAAACCCTTCTCCATGGCGGCGTTGCTTCCCGGTCCTCTCCTTCTTCGGACACCACCGACGCCTCTGTCGTTGTTACGGCGGAGCCTCCTTCTTCCTCCGCTGCCGCAGCAGCGCCTTCCGGTCCCGTGAAGGCCTCGAACCGGTGCCGTGGTTGCAACAAGAAGGTTGGGCTGACGGGTTTCGTTTGCAAGTGTGGAGCGACGTTCTGCGGCGTTCACCGTTATCCAGAGAGGCACGATTGTCCGTTTGATTTCAAGGGCGTTGGACGTGACGCGATTTCCAAGGCTAATCCTGTTGTGAAAGCAGATAAGCTCGATAAGTTTTAG 504 0.5575 MASEHNNDNSTSYQPSEPRPCTNGCGFFGTAGNRDLCSKCFRDLFLEEQRAASAKVVVEKTLLHGGVASRSSPSSDTTDASVVVTAEPPSSSAAAAAPSGPVKASNRCRGCNKKVGLTGFVCKCGATFCGVHRYPERHDCPFDFKGVGRDAISKANPVVKADKLDKF 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01514 167 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Aip01g01514 167 Gene3D - 1 78 - -
Aip01g01514 167 MobiDBLite consensus disorder prediction 1 20 - -
Aip01g01514 167 SMART AN1_Zf_4 108 145 IPR000058 GO:0008270
Aip01g01514 167 Gene3D - 79 163 IPR035896 -
Aip01g01514 167 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 1 1 167 - -
Aip01g01514 167 MobiDBLite consensus disorder prediction 67 88 - -
Aip01g01514 167 MobiDBLite consensus disorder prediction 1 19 - -
Aip01g01514 167 ProSiteProfiles Zinc finger AN1-type profile. 102 148 IPR000058 GO:0008270
Aip01g01514 167 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 167 - -
Aip01g01514 167 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 21 59 - -
Aip01g01514 167 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Aip01g01514 167 Pfam A20-like zinc finger 19 42 IPR002653 GO:0003677|GO:0008270
Aip01g01514 167 MobiDBLite consensus disorder prediction 66 100 - -
Aip01g01514 167 SUPERFAMILY AN1-like Zinc finger 98 162 IPR035896 -
Aip01g01514 167 Pfam AN1-like Zinc finger 108 144 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01514 Aip-Chr1 50903655 50904677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01514 1 167 C2H2 Transcription Factor Family AT3G52800 42.286 9.28e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01514 - - adu:107472707 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01514 01 50903655 50904677 Aip01g01514 01 50903655 50904677 ECH