Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01499 ATGCTTAATAAATTTGTGTATTCTAGGCTGAGTTTTGCGCTATTCATTCTTGTGATTACTGATTCTGAAATTTCTAATGTTGTGGCTTATCTTTGTGTTTGTGTTTGTGTTGCTACTGATGCTATCATTGCCAAATATACAAGGGCAGACATCCCTACATTGGACAAGAAAAAACAACTCCTGAAATTGATCACACATATTGGTGGATTGTTGGTGCTAATTGCGGTTGTGCCCCTGCTATTTGCATTCGTGTTGCTGCTGCTGTTATTGGCGTTCGTAGTTGCAACTGTACTTCTATGCAAAGAAACTCAATGCACCTCAGCCCCATTCCTCTCTGAAATTGAAAGAAAAAAGCAAATCAAGCTCTACACACCCATTGACCCAGCCCCGCCGCCCGCAGCCACTCTAACTATCGCAGCCACCTCAATTTTGGTGAGAATGTCATTTCTACTTCACTCCGATGAGGAGTTCCTAAGAGGAGACGATCTAGATTTTTTAGACGACGATTCAGAGGCTGATAAAGATAGACCTCAAGATAAGAGAATAGCAGAGCTGCCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGTTGTTTATCGATTCTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTCCGTAATTATGCGCCAAATTGTTTGCAATCAGGCAGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAAGGACCACCGACCCCTAACTCGAAGTTGTTGCCGGGCAAGAATTCGTGCAAGACTAGATACAAAAATTCAGAAATGGAAGGTCGTTTCGTTCTACGAAGAGCACTCTCATGAATTAGTTGCTCCACTCGACGTTAGCATGATGCCTGAGTATTGCACATTCAGTGTCTTGGATAAATCTCAGGCAAAGAATTTGCACTACATAGGCATCAGGACCTGTCACATCTTGGGATACTTGGCTGCTCAAAAAGGTGGATATGCGAACTTGTCATTTAACCAAAAAGATATGTACAACCTCATTACTCAACATATGAAAGAAAAGGTGAAGGGTGGTGATGCAAATGATGCAATAAGATACCTGAGAGGTAAAGCTGGGTATGATTCTTATTTCTTTGGCAAGTACACATTAAGTAATGAGAATCGATTGGAAAATTTGTTCTGGGCTGATGGGACTAGCCGTATTGATTATGAGTGCTTTGGGGATGTCTTGACATTTGATTCGACTTACAATAGGAATGTCTACAATAAACCACCTGTGATATTTTCTGGTAGCAATCATCATGGGCAGACCGTCGTATTTGGTTGTGGTCTTCTTGTTAATGAGGATATTGGTTCATACAAGTGGCTATTGGAAACTTTTTTGGAAGCAATGGGGAGTAAACACCCTACGGCAGTTGTCACCGACGGAGATCTTTCAATGAGAGAAGCAATTAAGCAGAGTTTCAGGTATAACTTATTAAGAAACTCTTGGGTCGTCCAAACCTATGAGTTGGGGAATCTATGGGCTCTTGCATATTTGAGGGACCAATTTTTTGGGCGAATCAGGACAACATCCCAGTGTGAAGGGATTAACTCTCTAATAAAAGCATATGTGAGAAAGAAAGATACCCTTCTTGAATTCATCAATAACATAGAGACTGTGGTTAGCCATTACAGGAACAATGAAAGAGTCGCAGAGTTCAATAGTAAATATACCGATCCAATACTTGTGACTTCTTTGCCGACACTTGAAGATTTTGCTGCAAAGACTTTCACTCGTAACATGTTCCGGGAGGTCAGGAAGGAAATTGAGGGTGCTTGTGCAATGAATACAGAGTTGGTAATTCAGGTTGGTGGAAAACTATACTTCAAGTGTAATAGTTTTGGATTGCCGGAGATTGATCATGTTGTTGAGTTTGACAGAGTTGGGGGGATGCTTCGTTGCGAGTGTATGTGGTTCGAAAATAGAGGAATTCCCTGCATGCACATATTTGCCTGCCTAAAGCACCAACATGTTGAAGTTATTCCAGAACGCTTAGTGTGCAAGTGTTGGGCGAAGAATGCCAAGAGTGACTTCATGAAGTCAAACGTCGATGATCCAAGTGATTCTGATAAGCACAAAAGACATGATAGTGTGAAAAATCAGCAGAAGATGGAAAAAGATAGGAACATTGGTGGTGGAACAACACCAACCTCAGCAGCTAAATCGGATTATACTGATCAAGTGAAAACATCAAGTCCTGGTCCCGATATCCCGGTTTGTGCATCTACAAGTAACGAAGAGTCCGGGTTGAGTTCCAGACCAGCAGAGTCTCCTGTTGTTGCCCCTGAAACTGGAATGGCAGATTGA 2364 0.4196 MLNKFVYSRLSFALFILVITDSEISNVVAYLCVCVCVATDAIIAKYTRADIPTLDKKKQLLKLITHIGGLLVLIAVVPLLFAFVLLLLLLAFVVATVLLCKETQCTSAPFLSEIERKKQIKLYTPIDPAPPPAATLTIAATSILVRMSFLLHSDEEFLRGDDLDFLDDDSEADKDRPQDKRIAELPREDIMQLQFTDEEVVYRFYKTYAMMHGFAVRLDEVRRDSDGSVIMRQIVCNQAGSRKEEVEKDERIKDHRPLTRSCCRARIRARLDTKIQKWKVVSFYEEHSHELVAPLDVSMMPEYCTFSVLDKSQAKNLHYIGIRTCHILGYLAAQKGGYANLSFNQKDMYNLITQHMKEKVKGGDANDAIRYLRGKAGYDSYFFGKYTLSNENRLENLFWADGTSRIDYECFGDVLTFDSTYNRNVYNKPPVIFSGSNHHGQTVVFGCGLLVNEDIGSYKWLLETFLEAMGSKHPTAVVTDGDLSMREAIKQSFRYNLLRNSWVVQTYELGNLWALAYLRDQFFGRIRTTSQCEGINSLIKAYVRKKDTLLEFINNIETVVSHYRNNERVAEFNSKYTDPILVTSLPTLEDFAAKTFTRNMFREVRKEIEGACAMNTELVIQVGGKLYFKCNSFGLPEIDHVVEFDRVGGMLRCECMWFENRGIPCMHIFACLKHQHVEVIPERLVCKCWAKNAKSDFMKSNVDDPSDSDKHKRHDSVKNQQKMEKDRNIGGGTTPTSAAKSDYTDQVKTSSPGPDIPVCASTSNEESGLSSRPAESPVVAPETGMAD 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01499 787 ProSiteProfiles Zinc finger SWIM-type profile. 638 676 IPR007527 GO:0008270
Aip01g01499 787 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 189 491 IPR031052 GO:0006355
Aip01g01499 787 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 500 720 IPR031052 GO:0006355
Aip01g01499 787 Pfam MULE transposase domain 414 493 IPR018289 -
Aip01g01499 787 MobiDBLite consensus disorder prediction 726 771 - -
Aip01g01499 787 Pfam FAR1 DNA-binding domain 203 292 IPR004330 -
Aip01g01499 787 MobiDBLite consensus disorder prediction 699 725 - -
Aip01g01499 787 PANTHER OS02G0262500 PROTEIN 189 491 - -
Aip01g01499 787 MobiDBLite consensus disorder prediction 699 787 - -
Aip01g01499 787 PANTHER OS02G0262500 PROTEIN 500 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01499 Aip-Chr1 50440014 50447900 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip01g01499 FAR1 3.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01499 - - aip:107620373 989.949