Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g01488 ATGGGCGAGGAAGGGAGCAACTGGGAGAAGGAGAATGCGCGGTGCGTGGCGGACGGAAATGAGGTTATGCGGTTCCAATGCTTGGGTCCCACGGAGGACGGCGCCGCCGCGGTCTGGTCGTTTCCGGAGAGGAAGGGCTCGACAATCTGCACGTTTTCCGGCAGCGGTGGTGCACACGAGAGCGCCGGCGGCGGCAAGGGAAGGAGGGCGATGCTCGTTTGCCGGGTAGTTGCGGGTCGGGTCTCGAAGCAACTCGGGATCGCTGACTCGGGGTTGGAGAAGCGAGTTGGGTTTGACTCGGTGAGTGGGGAAAACGGTGACTTGTTAGTGTTCGACTCGCGGGCCGTGTTGCCCTGTTTTCTTATTATTTACAGATTGTAA 381 0.601 MGEEGSNWEKENARCVADGNEVMRFQCLGPTEDGAAAVWSFPERKGSTICTFSGSGGAHESAGGGKGRRAMLVCRVVAGRVSKQLGIADSGLEKRVGFDSVSGENGDLLVFDSRAVLPCFLIIYRL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g01488 126 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 6 125 - -
Aip01g01488 126 Gene3D - 45 125 - -
Aip01g01488 126 SUPERFAMILY ADP-ribosylation 62 125 - -
Aip01g01488 126 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 6 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g01488 Aip-Chr1 49054558 49054938 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g01488 5 124 C2H2 Transcription Factor Family AT2G29660 36.306 3.89e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g01488 - - gmx:100811674 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g01488 01 49054558 49054938 Aip01g01488 01 49054558 49054938 ECH