LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip01g01483	ATGGGAGTAGAGGCGCGAAACAAATCCCCAATCGTGAATCCTTGCCGCCGTGTAGCCACCGCTCGTCAGTACCAGTTGCGTGGTGCTTCCCCCTGCTGGTGGCCGCCTTCTGCTTATTGTTTGGTGGACAACGCAAGACCAGTGATAGTGCAGATCTCAGCTCTTGTTAATAAGCGAAGGAAAAGTCAGGCAAAGAAGTCGATTTGTATTCCAGCAGCAGCATCACCAAGCAGTAGACAAGGTGAGGAAGTAGTTCCCTCTGATCTATGGGCTTTTTCAAGGGTGTTGGTCCTGGAGTTGAAGTTATTGAGCTCTTTAAGGTTAAAGTTTGGTGGTGCCTTTGCTGGAAATCCGTATGGCTCGGTAATAGGTGCTGCAGGAGCTGGATATGGTGTTGCTCCTAGCTGGATGGTTCTGATGGGTGCAGAACAACTCTATACCGATCATTTGCATCCATTCCTGTTGAGGCATCAAGCTAGACTTGATCAAGTTGTCGATGTTGTGTATGGTGAAATGAGTAAATCTGTCATTGCACACCAGGTGGAATTCCAACTTGCAAGATCTCTACGGATGAACATTTTAGTGACATCAAATCAAATGGTTAGGAATATCATTCTACCGGTTAGAAGGGAACCAAATTGTATCGAAGGACCAAAGAGGCTGCAGGTTCAGGATTCTGAATCAGACGAAGAGTGA	696	0.467	MGVEARNKSPIVNPCRRVATARQYQLRGASPCWWPPSAYCLVDNARPVIVQISALVNKRRKSQAKKSICIPAAASPSSRQGEEVVPSDLWAFSRVLVLELKLLSSLRLKFGGAFAGNPYGSVIGAAGAGYGVAPSWMVLMGAEQLYTDHLHPFLLRHQARLDQVVDVVYGEMSKSVIAHQVEFQLARSLRMNILVTSNQMVRNIILPVRREPNCIEGPKRLQVQDSESDEE	231

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip01g01483	231	PANTHER	HVA22-LIKE PROTEINS	141	230	IPR004345	-
	Aip01g01483	231	PANTHER	HVA22-LIKE PROTEIN	141	230	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip01g01483	Aip-Chr1	48560448	48564017	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip01g01483	50	94	WRKY Transcription Factor Family	AT1G30650	60.417	3.14e-09	54.7

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip01g01483	K17279		-	gmx:100801683	105.145